ONIVA07G22340 (Oryza nivara)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ONIVA07G22340 T344150_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.969 0.556
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.969 0.549
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.953 0.496
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.953 0.489
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.953 0.489
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.944 0.474
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.939 0.436
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.939 0.444
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.939 0.451
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.938 0.429
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.938 0.429
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.938 0.429
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.938 0.429
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.932 0.436
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.932 0.436
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.930 0.436
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.927 0.399
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.926 0.399
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.926 0.399
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.926 0.399
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.926 0.399
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.925 0.399
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.925 0.353
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.923 0.368
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.923 0.361
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.922 0.391
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.920 0.376
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.920 0.376
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.920 0.376
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.918 0.391
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.918 0.391
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.918 0.391
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.911 0.346
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.861 0.406
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.861 0.406
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA07G22340.1 TCP 53 206

Links

Other TCP family TFs
Other Oryza nivara TFs

632 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOC_0000735101 Angiostrongylus costaricensis ACOC_0000735101 N 0.000
ANCCEY_08318 Ancylostoma ceylanicum ANCCEY_08318 N 0.000
ASU_12421 Ascaris suum ASU_12421 N 0.000
Bm4516 Brugia malayi Bm4516 N 0.000
BTMF_0000196601 Brugia timori BTMF_0000196601 N 0.000
BXY_0943600 Bursaphelenchus xylophilus BXY_0943600 N 0.000
CBG12652 Caenorhabditis briggsae CBG12652 N 0.000
CBN08911 Caenorhabditis brenneri CBN08911 N 0.000
CBN31474 Caenorhabditis brenneri CBN31474 N 0.000
CJA17455 Caenorhabditis japonica CJA17455 N 0.000
CRE24738 Caenorhabditis remanei CRE24738 N 0.000
DICVIV_10160 Dictyocaulus viviparus DICVIV_10160 N 0.000
DME_0000611701 Dracunculus medinensis DME_0000611701 N 0.000
GPLIN_001183200 Globodera pallida GPLIN_001183200 N 0.000
HCOI01581600 Haemonchus contortus HCOI01581600 N 0.000
L889_g21858 Steinernema feltiae L889_g21858 N 0.000
L892_g27212 Steinernema scapterisci L892_g27212 N 0.000
L893_g27569 Steinernema glaseri L893_g27569 N 0.000
L898_g616 Steinernema monticolum L898_g616 N 0.000
let-607 Caenorhabditis elegans WBGene00002783 N 0.000
nAv.1.0.1.g00516 Acanthocheilonema viteae nAv.1.0.1.g00516 N 0.000
nDi.2.2.2.g01644 Dirofilaria immitis nDi.2.2.2.g01644 N 0.000
NECAME_02209 Necator americanus NECAME_02209 N 0.000
PTRK_0000278100 Parastrongyloides trichosuri PTRK_0000278100 N 0.000
PTRK_0001321400 Parastrongyloides trichosuri PTRK_0001321400 N 0.000
RSKR_0000919500 Rhabditophanes kr3021 RSKR_0000919500 N 0.000
SPAL_0001235900 Strongyloides papillosus SPAL_0001235900 N 0.000
SPAL_0001311500 Strongyloides papillosus SPAL_0001311500 N 0.000
SSTP_0000280500 Strongyloides stercoralis SSTP_0000280500 N 0.000
SSTP_0000575300 Strongyloides stercoralis SSTP_0000575300 N 0.000
SVE_0150100 Strongyloides venezuelensis SVE_0150100 N 0.000
SVE_0362500 Strongyloides venezuelensis SVE_0362500 N 0.000
WUBG_03758 Wuchereria bancrofti WUBG_03758 N 0.000