ONIVA08G16720 (Oryza nivara)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ONIVA08G16720 T344151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.826 0.374
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA08G16720.1 TCP 86 224

Links

Other TCP family TFs
Other Oryza nivara TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30167.m000856 Ricinus communis 30167.m000856 I 0.833
30174.m008721 Ricinus communis 30174.m008721 I 0.868
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.832
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.826
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.966
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.914
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.833
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.927
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.913
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.867
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.870
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.832
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.822
F775_01923 Aegilops tauschii F775_01923 I 0.916
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.822
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.822
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.839
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.833
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.871
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.901
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.893
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.864
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.915
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.905
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.896
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.831
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.832
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.932
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.924
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.846
MDP0000224810 Malus domestica MDP0000224810 N 0.827
mgf024687m Mimulus guttatus mgf024687m I 0.826
mgf026636m Mimulus guttatus mgf026636m I 0.832
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.919
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.917
OBART03G31290 Oryza barthii OBART03G31290 I 0.831
OBART08G15630 Oryza barthii OBART08G15630 N 0.970
OBART09G10040 Oryza barthii OBART09G10040 I 0.914
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.826
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.963
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.914
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.828
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.963
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.930
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.826
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.914
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.829
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.947
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.916
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.831
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.978
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.826
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.966
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.914
OS08G0432300 Oryza sativa OS08G0432300 I 0.966
OS09G0410500 Oryza sativa OS09G0410500 I 0.914
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.927
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.928
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.896
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.892
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.826
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.823
Pm030202 Prunus mume Pm030202 I 0.828
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.852
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.853
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.828
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.825
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.868
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.851
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.865
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.865
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.823
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.916
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.893
Si015230m.g Setaria italica Si015230m.g I 0.907
Si033183m.g Setaria italica Si033183m.g I 0.934
TB1 Oryza sativa OS03G0706500 D 0.826
TCM_012252 Theobroma cacao TCM_012252 I 0.828
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.917
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.909
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.911