CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC03G28490
(
Oryza punctata
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
OPUNC03G28490
T344167_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM
KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.961
0.806
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS
SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.852
0.387
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC03G28490.1
TCP
101
255
AARKDRHSKISTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNMSKAAIREIMSDDASSVCEEDGSSSLSVDGKPHSSPAEGGAAGDHKGAHSHSDGKKPAKPRRAAATPKPPRRLANAHPVPDKESRAKARERARERTKEKNRMR
Links
Other
TCP
family TFs
Other
Oryza punctata
TFs
100 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC233950.1_FG002
Zea mays
AC233950.1_FG002
I
0.962
ORUFI03G32570
Oryza rufipogon
ORUFI03G32570
I
0.961
TB1
Oryza sativa
OS03G0706500
D
0.961
OGLUM03G31540
Oryza glumaepatula
OGLUM03G31540
I
0.961
ONIVA03G32600
Oryza nivara
ONIVA03G32600
I
0.961
BGIOSGA013417
Oryza indica
BGIOSGA013417
I
0.961
ORGLA03G0289500
Oryza glaberrima
ORGLA03G0289500
I
0.956
OBART03G31290
Oryza barthii
OBART03G31290
I
0.956
OMERI03G27910
Oryza meridionalis
OMERI03G27910
I
0.955
OB03G38320
Oryza brachyantha
OB03G38320
I
0.951
Traes_4DS_59A46B69A
Triticum aestivum
Traes_4DS_59A46B69A
I
0.949
Traes_4AL_75D069945
Triticum aestivum
Traes_4AL_75D069945
I
0.949
Sb01g010690
Sorghum bicolor
Sb01g010690
I
0.949
AC190734.2_FG003
Zea mays
AC190734.2_FG003
I
0.949
Traes_4BS_DC076554D
Triticum aestivum
Traes_4BS_DC076554D
I
0.949
TRIUR3_31795
Triticum urartu
TRIUR3_31795
I
0.949
MLOC_70116
Hordeum vulgare
MLOC_70116
I
0.945
LPERR03G25950
Leersia perrieri
LPERR03G25950
I
0.941
Pavir.Ia00838
Panicum virgatum
Pavir.Ia00838
I
0.939
Pavir.Ib04362
Panicum virgatum
Pavir.Ib04362
I
0.936
Si038692m.g
Setaria italica
Si038692m.g
I
0.927
BRADI1G11060
Brachypodium distachyon
BRADI1G11060
I
0.925
GRMZM2G110242
Zea mays
GRMZM2G110242
I
0.877
Traes_5DL_46A3B0DAB1
Triticum aestivum
Traes_5DL_46A3B0DAB1
I
0.875
GSMUA_Achr2G22480_001
Musa acuminata
GSMUA_Achr2G22480_001
I
0.866
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
0.863
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.863
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
0.863
Cagra.1125s0016
Capsella grandiflora
Cagra.1125s0016
I
0.858
SapurV1A.0682s0140
Salix purpurea
SapurV1A.0682s0140
I
0.857
Pm030202
Prunus mume
Pm030202
I
0.857
PRUPE_ppa015026mg
Prunus persica
PRUPE_ppa015026mg
I
0.857
Bostr.26959s0184
Boechera stricta
Bostr.26959s0184
I
0.856
GRMZM2G031905
Zea mays
GRMZM2G031905
I
0.855
GLYMA17G13065
Glycine max
GLYMA17G13065
I
0.852
PK12240.1
Cannabis sativa
PK12240.1
D
0.852
Cucsa.280880
Cucumis sativus
Cucsa.280880
I
0.852
OMERI09G07770
Oryza meridionalis
OMERI09G07770
I
0.849
Aquca_002_01093
Aquilegia coerulea
Aquca_002_01093
I
0.849
mgf024687m
Mimulus guttatus
mgf024687m
I
0.848
Carubv10020555m.g
Capsella rubella
Carubv10020555m.g
I
0.848
GRMZM2G062711
Zea mays
GRMZM2G062711
I
0.847
BRADI4G29980
Brachypodium distachyon
BRADI4G29980
I
0.847
Pavir.Bb02154
Panicum virgatum
Pavir.Bb02154
I
0.847
Traes_5BL_19F383CC71
Triticum aestivum
Traes_5BL_19F383CC71
I
0.845
Pavir.Fa00870
Panicum virgatum
Pavir.Fa00870
I
0.843
BRC2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000933
I
0.843
Lus10035055.g
Linum usitatissimum
Lus10035055.g
I
0.842
TCM_012252
Theobroma cacao
TCM_012252
I
0.841
MLOC_4614
Hordeum vulgare
MLOC_4614
I
0.840
Pavir.Fb01590
Panicum virgatum
Pavir.Fb01590
I
0.838
evm.TU.supercontig_179.29
Carica papaya
evm.TU.supercontig_179.29
I
0.838
OPUNC08G13710
Oryza punctata
OPUNC08G13710
I
0.838
cassava10552.m1
Manihot esculenta
cassava10552.m1
I
0.837
Bra004097
Brassica rapa
Bra004097
I
0.837
OPUNC09G08520
Oryza punctata
OPUNC09G08520
I
0.836
GLYMA04G22407
Glycine max
GLYMA04G22407
I
0.835
TRIUR3_20728
Triticum urartu
TRIUR3_20728
I
0.835
BRC2
Arabidopsis thaliana
AT1G68800
I
0.835
GSMUA_Achr2G21050_001
Musa acuminata
GSMUA_Achr2G21050_001
I
0.834
gene03882-v1.0-hybrid
Fragaria vesca
gene03882-v1.0-hybrid
I
0.834
Gorai.008G285300
Gossypium raimondii
Gorai.008G285300
I
0.833
GRMZM2G064628
Zea mays
GRMZM2G064628
I
0.832
Carubv10020487m.g
Capsella rubella
Carubv10020487m.g
I
0.831
Pavir.Ba01820
Panicum virgatum
Pavir.Ba01820
I
0.831
Bostr.26959s0002
Boechera stricta
Bostr.26959s0002
I
0.831
Carubv10013748m.g
Capsella rubella
Carubv10013748m.g
I
0.831
Cagra.1157s0001
Capsella grandiflora
Cagra.1157s0001
I
0.831
Cagra.1681s0023
Capsella grandiflora
Cagra.1681s0023
I
0.831
TCP1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001059
I
0.831
30167.m000856
Ricinus communis
30167.m000856
I
0.831
LPERR08G12880
Leersia perrieri
LPERR08G12880
I
0.831
Si033183m.g
Setaria italica
Si033183m.g
I
0.831
GRMZM2G060319
Zea mays
GRMZM2G060319
I
0.830
ONIVA08G16720
Oryza nivara
ONIVA08G16720
I
0.829
ORGLA08G0137200
Oryza glaberrima
ORGLA08G0137200
I
0.829
ORUFI09G10660
Oryza rufipogon
ORUFI09G10660
I
0.829
BGIOSGA030744
Oryza indica
BGIOSGA030744
I
0.829
ONIVA09G09540
Oryza nivara
ONIVA09G09540
I
0.829
OGLUM09G10300
Oryza glumaepatula
OGLUM09G10300
I
0.829
OS09G0410500
Oryza sativa
OS09G0410500
I
0.829
Cucsa.238090
Cucumis sativus
Cucsa.238090
I
0.829
OBART09G10040
Oryza barthii
OBART09G10040
I
0.829
Sb02g024450
Sorghum bicolor
Sb02g024450
I
0.828
Si015230m.g
Setaria italica
Si015230m.g
I
0.828
Bostr.19424s0807
Boechera stricta
Bostr.19424s0807
I
0.828
F775_01923
Aegilops tauschii
F775_01923
I
0.828
LPERR09G06870
Leersia perrieri
LPERR09G06870
I
0.827
Bo3g071560
Brassica oleracea
Bo3g071560
I
0.827
MLOC_58142
Hordeum vulgare
MLOC_58142
I
0.826
GRMZM2G166687
Zea mays
GRMZM2G166687
I
0.826
POPTR_0017s13980
Populus trichocarpa
POPTR_0017s13980
I
0.825
GRMZM2G055024
Zea mays
GRMZM2G055024
I
0.825
PDK_20s1689851g001
Phoenix dactylifera
PDK_20s1689851g001
I
0.824
SapurV1A.1895s0010
Salix purpurea
SapurV1A.1895s0010
I
0.824
SapurV1A.1895s0020
Salix purpurea
SapurV1A.1895s0020
I
0.824
GSMUA_Achr10G25520_001
Musa acuminata
GSMUA_Achr10G25520_001
I
0.823
MDP0000224810
Malus domestica
MDP0000224810
N
0.823
Sb07g021140
Sorghum bicolor
Sb07g021140
I
0.822
Cucsa.283930
Cucumis sativus
Cucsa.283930
I
0.822