ORUFI02G34160 (Oryza rufipogon)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ORUFI02G34160 T344205_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP24
M02499_2.00
Arabidopsis thaliana
NNNNRVMCVV

BBGKBYNNNN
PBM
Weirauch et al.(2014)
pTH7337
0.939 0.567
TCP24
M07272_2.00
Arabidopsis thaliana
GTGGGGACCAC

GTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
TCP24_colamp_a
0.939 0.567
TCP24
M07273_2.00
Arabidopsis thaliana
NNBGGGACCACH

DGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
TCP24_col
0.939 0.567
TCP24
M02506_2.00
Arabidopsis lyrata
NBKKNNMMVN

NBKKNNMMVN
PBM
Weirauch et al.(2014)
pTH9227
0.937 0.567
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI02G34160.1 TCP 31 88
ORUFI02G34160.1 TCP 91 149

Links

Other TCP family TFs
Other Oryza rufipogon TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OGLUM02G33090 Oryza glumaepatula OGLUM02G33090 I 0.975
Bra032365 Brassica rapa Bra032365 I 0.947
Bo5g062580 Brassica oleracea Bo5g062580 I 0.941
Bostr.15697s0315 Boechera stricta Bostr.15697s0315 I 0.939
OBART07G03380 Oryza barthii OBART07G03380 I 0.939
TCP24 Arabidopsis thaliana AT1G30210 D 0.939
ORUFI07G03030 Oryza rufipogon ORUFI07G03030 I 0.939
TCP24 Arabidopsis lyrata fgenesh2_kg.1__3195__AT1G30210.2 D 0.937
Lus10038512.g Linum usitatissimum Lus10038512.g I 0.934
Thhalv10008175m.g Eutrema salsugineum Thhalv10008175m.g I 0.932
mgf025386m Mimulus guttatus mgf025386m I 0.931
BRC1 Vitis vinifera VIT_17s0000g04180 I 0.923
OS07G0152000 Oryza sativa OS07G0152000 I 0.922
BGIOSGA025162 Oryza indica BGIOSGA025162 I 0.922
ORGLA07G0028600 Oryza glaberrima ORGLA07G0028600 I 0.921
OGLUM07G02670 Oryza glumaepatula OGLUM07G02670 I 0.921
ONIVA07G01330 Oryza nivara ONIVA07G01330 I 0.921
Thhalv10018773m.g Eutrema salsugineum Thhalv10018773m.g I 0.914
gene10333-v1.0-hybrid Fragaria vesca gene10333-v1.0-hybrid I 0.909
PGSC0003DMG400010045 Solanum tuberosum PGSC0003DMG400010045 I 0.908
Ciclev10012612m.g Citrus clementina Ciclev10012612m.g I 0.908
orange1.1g047495m.g Citrus sinensis orange1.1g047495m.g I 0.908
Ciclev10007109m.g Citrus clementina Ciclev10007109m.g I 0.906
Eucgr.G02354 Eucalyptus grandis Eucgr.G02354 I 0.903
Bo6g107240 Brassica oleracea Bo6g107240 I 0.903
chr3.CM0282.560.nc Lotus japonicus chr3.CM0282.560.nc I 0.901
Solyc02g089830.1 Solanum lycopersicum Solyc02g089830.1 I 0.901
Lus10017856.g Linum usitatissimum Lus10017856.g I 0.898
Cla020670 Citrullus lanatus Cla020670 I 0.896
Lus10042962.g Linum usitatissimum Lus10042962.g I 0.879
mgf014960m Mimulus guttatus mgf014960m I 0.863
MTR_7g015010 Medicago truncatula MTR_7g015010 I 0.858
Sb08g004610 Sorghum bicolor Sb08g004610 N 0.827
Carubv10010909m.g Capsella rubella Carubv10010909m.g N 0.825