ORUFI09G18080 (Oryza rufipogon)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ORUFI09G18080 T344218_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.834 0.459
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI09G18080.1 TCP 50 147

Links

Other TCP family TFs
Other Oryza rufipogon TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PCF2 Oryza sativa OS08G0544800 D 0.834
LjSGA_035107.1 Lotus japonicus LjSGA_035107.1 I 0.876
PGSC0003DMG400000597 Solanum tuberosum PGSC0003DMG400000597 I 0.876
OS09G0521300 Oryza sativa OS09G0521300 I 0.836
ORUFI09G18130 Oryza rufipogon ORUFI09G18130 I 0.839
ORUFI08G24920 Oryza rufipogon ORUFI08G24920 I 0.834
ORUFI01G09990 Oryza rufipogon ORUFI01G09990 I 0.849
ORGLA09G0132500 Oryza glaberrima ORGLA09G0132500 I 0.836
OPUNC09G15210 Oryza punctata OPUNC09G15210 I 0.843
OPUNC08G20520 Oryza punctata OPUNC08G20520 I 0.838
ONIVA09G17830 Oryza nivara ONIVA09G17830 I 0.835
ONIVA08G25460 Oryza nivara ONIVA08G25460 I 0.834
OMERI09G12430 Oryza meridionalis OMERI09G12430 I 0.839
PRUPE_ppa024948mg Prunus persica PRUPE_ppa024948mg I 0.876
Si010765m.g Setaria italica Si010765m.g I 0.872
Traes_4AL_E57587E16 Triticum aestivum Traes_4AL_E57587E16 I 0.852
Pavir.J12088 Panicum virgatum Pavir.J12088 I 0.834
Pavir.J05134 Panicum virgatum Pavir.J05134 I 0.856
Pavir.Ca00220 Panicum virgatum Pavir.Ca00220 I 0.872
Lus10035193.g Linum usitatissimum Lus10035193.g I 0.877
Lus10008621.g Linum usitatissimum Lus10008621.g I 0.882
Lus10008444.g Linum usitatissimum Lus10008444.g I 0.830
evm.TU.supercontig_1815.2 Carica papaya evm.TU.supercontig_1815.2 I 0.868
Cagra.4247s0002 Capsella grandiflora Cagra.4247s0002 I 0.865
cassava35071.m1 Manihot esculenta cassava35071.m1 I 0.830
cassava20535.m1 Manihot esculenta cassava20535.m1 I 0.879
30174.m008944 Ricinus communis 30174.m008944 I 0.822
Ca_25231 Cicer arietinum Ca_25231 I 0.883
OMERI08G17330 Oryza meridionalis OMERI08G17330 I 0.834
OLONG_019922 Oryza longistaminata OLONG_019922 I 0.922
GSMUA_Achr5G03320_001 Musa acuminata GSMUA_Achr5G03320_001 I 0.898
GSMUA_Achr4G27220_001 Musa acuminata GSMUA_Achr4G27220_001 I 0.894
GSMUA_Achr3G12320_001 Musa acuminata GSMUA_Achr3G12320_001 I 0.896
GSMUA_Achr2G10690_001 Musa acuminata GSMUA_Achr2G10690_001 I 0.862
GSMUA_Achr11G17370_001 Musa acuminata GSMUA_Achr11G17370_001 I 0.892
GRMZM2G107031 Zea mays GRMZM2G107031 I 0.843
GLYMA07G29015 Glycine max GLYMA07G29015 I 0.909
Bra029366 Brassica rapa Bra029366 I 0.859
Bra007875 Brassica rapa Bra007875 I 0.873
Bra003986 Brassica rapa Bra003986 I 0.875
BGIOSGA029420 Oryza indica BGIOSGA029420 I 0.836
PCF2 Oryza indica BGIOSGA026548 I 0.834
GSMUA_Achr6G07930_001 Musa acuminata GSMUA_Achr6G07930_001 I 0.862
GSMUA_AchrUn_randomG08350_001 Musa acuminata GSMUA_AchrUn_randomG08350_001 I 0.877
OLONG_002160 Oryza longistaminata OLONG_002160 I 0.839
OGLUM09G17360 Oryza glumaepatula OGLUM09G17360 I 0.836
OGLUM08G23730 Oryza glumaepatula OGLUM08G23730 I 0.834
OBART08G22390 Oryza barthii OBART08G22390 I 0.829
OB08G29160 Oryza brachyantha OB08G29160 I 0.842
MLOC_61513 Hordeum vulgare MLOC_61513 I 0.877
MLOC_60577 Hordeum vulgare MLOC_60577 I 0.855
MLOC_24269 Hordeum vulgare MLOC_24269 I 0.875
LPERR09G12890 Leersia perrieri LPERR09G12890 I 0.822
LPERR08G19160 Leersia perrieri LPERR08G19160 I 0.844
BGIOSGA015954 Oryza indica BGIOSGA015954 I 0.876
Bra032973 Brassica rapa Bra032973 N 0.830
OBART10G07150 Oryza barthii OBART10G07150 N 0.830
OGLUM04G24370 Oryza glumaepatula OGLUM04G24370 N 0.853