PGSC0003DMG400019904 (Solanum tuberosum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PGSC0003DMG400019904 T344263_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LjT20A21.20.nc
M02519_2.00
Lotus japonicus
GGGACCAY

RTGGTCCC
PBM
Weirauch et al.(2014)
pTH9202
0.934 0.558
TCP2
M02503_2.00
Arabidopsis thaliana
NBGGKMCCVN

NBGGKMCCVN
PBM
Weirauch et al.(2014)
pTH8198
0.928 0.537
TCP2
M02508_2.00
Arabidopsis lyrata
GGSMCCAC

GTGGKSCC
PBM
Weirauch et al.(2014)
pTH9231
0.928 0.537
PK10344.1
M01313_2.00
Cannabis sativa
GGGACCAC

GTGGTCCC
PBM
Lambert et al.(2019)
pTH11464
0.902 0.340
TCP5
M02505_2.00
Arabidopsis thaliana
GGGACCAY

RTGGTCCC
PBM
Weirauch et al.(2014)
pTH7523
0.894 0.408
TCP5
M02510_2.00
Arabidopsis lyrata
GGGACCAC

GTGGTCCC
PBM
Weirauch et al.(2014)
pTH9233
0.885 0.333
TCP4
M02514_2.00
Arabidopsis lyrata
BKGGGACCAC

GTGGTCCCMV
PBM
Weirauch et al.(2014)
pTH9313
0.877 0.327
TCP4
M02501_2.00
Arabidopsis thaliana
GGGACCAC

GTGGTCCC
PBM
Weirauch et al.(2014)
pTH8084
0.876 0.327
TCP3
M02500_2.00
Arabidopsis thaliana
NDGGMCCACN

NGTGGKCCHN
PBM
Weirauch et al.(2014)
pTH8835
0.872 0.327
TCP3
M07274_2.00
Arabidopsis thaliana
DHNGGGACCACH

DGTGGTCCCNDH
Dap-seq
OMalley et al.(2016)
TCP3_colamp_a
0.872 0.327
TCP3
M07275_2.00
Arabidopsis thaliana
DNBGGGACCACHN

NDGTGGTCCCVNH
Dap-seq
OMalley et al.(2016)
TCP3_col
0.872 0.327
TCP13
M07283_2.00
Arabidopsis thaliana
GTGGGGACCACWD

HWGTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
PTF1_col_a
0.867 0.347
TCP13
M07284_2.00
Arabidopsis thaliana
NNBGGGACCACHN

NDGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
PTF1_colamp_a
0.867 0.347
OS01G0213800
M11398_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF5_01
0.855 0.299
TCP17
M07290_2.00
Arabidopsis thaliana
GTGGGGACCAC

GTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
TCP17_col_a
0.844 0.313
TCP17
M07291_2.00
Arabidopsis thaliana
RTGGGGACCAC

GTGGTCCCCAY
Dap-seq
OMalley et al.(2016)
TCP17_colamp_a
0.844 0.313
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400051252 TCP 45 191
PGSC0003DMT400051253 TCP 45 191

Links

Other TCP family TFs
Other Solanum tuberosum TFs

434 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Tal_R009959 Tyto alba Tal_R009959 N 0.000
ZNF800 Taeniopygia guttata ENSTGUG00000004194 N 0.000
ZNF800 Tupaia belangeri ENSTBEG00000010278 N 0.000
ENSSTOG00000023294 Ictidomys tridecemlineatus ENSSTOG00000023294 N 0.000
ZNF800 Sus scrofa ENSSSCG00000024157 N 0.000
ENSSHAG00000014391 Sarcophilus harrisii ENSSHAG00000014391 N 0.000
ZNF800 Sorex araneus ENSSARG00000011650 N 0.000
Zfp800 Rattus norvegicus ENSRNOG00000007662 N 0.000
ZNF800 Pteropus vampyrus ENSPVAG00000013938 N 0.000
ZNF800 Pan troglodytes ENSPTRG00000019649 N 0.000
ENSPSIG00000013613 Pelodiscus sinensis ENSPSIG00000013613 N 0.000
ENSPPYG00000017967 Pongo abelii ENSPPYG00000017967 N 0.000
ZNF800 Procavia capensis ENSPCAG00000010526 N 0.000
ENSTSYG00000012016 Tarsius syrichta ENSTSYG00000012016 N 0.000
ZNF800 Tursiops truncatus ENSTTRG00000002541 N 0.000
Pvit_08298 Pogona vitticeps Pvit_08298 N 0.000
Ogr08884 Ophisaurus gracilis Ogr08884 N 0.000
Myotis_brandtii_ZNF800_10010521 Myotis brandtii Myotis_brandtii_ZNF800_10010521 N 0.000
Gfo_R005807 Geospiza fortis Gfo_R005807 N 0.000
ENSP00000376989 Macaca fascicularis ENSP00000376989 N 0.000
ENSBTAP00000026641-D1 Bos grunniens ENSBTAP00000026641-D1 N 0.000
Cmyd_10009488 Chelonia mydas Cmyd_10009488 N 0.000
Brh_R001393 Buceros rhinoceros Brh_R001393 N 0.000
Alligator_sinensis_CCG017296.1 Alligator sinensis Alligator_sinensis_CCG017296.1 N 0.000
Afo_R003498 Aptenodytes forsteri Afo_R003498 N 0.000
Aan_R000390 Calypte anna Aan_R000390 N 0.000
ZNF800 Vicugna pacos ENSVPAG00000008299 N 0.000
ENSPANG00000009849 Papio anubis ENSPANG00000009849 N 0.000
ZNF800 Ochotona princeps ENSOPRG00000007468 N 0.000
ZNF800 Otolemur garnettii ENSOGAG00000000339 N 0.000
ZNF800 Homo sapiens ENSG00000048405 N 0.000
ZNF800 Felis catus ENSFCAG00000025630 N 0.000
ENSFALG00000009810 Ficedula albicollis ENSFALG00000009810 N 0.000
ZNF800 Erinaceus europaeus ENSEEUG00000002568 N 0.000
ZNF800 Equus caballus ENSECAG00000019340 N 0.000
ENSDORG00000000999 Dipodomys ordii ENSDORG00000000999 N 0.000
ZNF800 Dasypus novemcinctus ENSDNOG00000009240 N 0.000
ENSCSAG00000010217 Chlorocebus sabaeus ENSCSAG00000010217 N 0.000
ZNF800 Cavia porcellus ENSCPOG00000007495 N 0.000
ZNF800 Canis familiaris ENSCAFG00000001733 N 0.000
ZNF800 Bos taurus ENSBTAG00000020004 N 0.000
ENSAPLG00000014433 Anas platyrhynchos ENSAPLG00000014433 N 0.000
ENSGALG00000028694 Gallus gallus ENSGALG00000028694 N 0.000
ZNF800 Gorilla gorilla ENSGGOG00000028009 N 0.000
ZNF800 Oryctolagus cuniculus ENSOCUG00000002127 N 0.000
ENSOARG00000001711 Ovis aries ENSOARG00000001711 N 0.000
ZNF800 Ornithorhynchus anatinus ENSOANG00000000823 N 0.000
ENSNLEG00000012232 Nomascus leucogenys ENSNLEG00000012232 N 0.000
Zfp800 Mus musculus ENSMUSG00000039841 N 0.000
ENSMPUG00000006731 Mustela putorius furo ENSMPUG00000006731 N 0.000
ZNF800 Monodelphis domestica ENSMODG00000015235 N 0.000
ZNF800 Macaca mulatta ENSMMUG00000002428 N 0.000
ZNF800 Myotis lucifugus ENSMLUG00000011636 N 0.000
ZNF800 Meleagris gallopavo ENSMGAG00000008232 N 0.000
ZNF800 Loxodonta africana ENSLAFG00000000456 N 0.000
ENSLACG00000012830 Latimeria chalumnae ENSLACG00000012830 N 0.000
ENSAMEG00000004627 Ailuropoda melanoleuca ENSAMEG00000004627 N 0.000