PRUPE_ppa018648mg (Prunus persica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PRUPE_ppa018648mg T344324_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.932 0.577
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.931 0.559
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.931 0.559
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.931 0.559
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.928 0.523
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.928 0.523
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.925 0.523
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.917 0.468
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.914 0.477
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.914 0.477
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.914 0.477
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.914 0.477
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.914 0.486
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.909 0.514
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.907 0.486
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.907 0.504
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.906 0.523
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.904 0.486
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.904 0.486
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.904 0.486
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.904 0.486
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.904 0.495
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.903 0.495
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.898 0.495
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.895 0.468
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.892 0.514
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.892 0.514
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.886 0.486
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.871 0.477
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.871 0.477
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.860 0.432
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.853 0.432
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.852 0.423
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.838 0.477
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.838 0.477
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ12256 TCP 91 211

Links

Other TCP family TFs
Other Prunus persica TFs

628 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TGA9 Arabidopsis thaliana AT1G08320 D 0.000
PK08582.1 Cannabis sativa PK08582.1 I 0.000
Eucgr.A02436 Eucalyptus grandis Eucgr.A02436 I 0.000
Carubv10011576m.g Capsella rubella Carubv10011576m.g I 0.000
Cagra.4395s0022 Capsella grandiflora Cagra.4395s0022 I 0.000
Bostr.25219s0112 Boechera stricta Bostr.25219s0112 I 0.000
Aquca_072_00138 Aquilegia coerulea Aquca_072_00138 I 0.000
Aquca_004_00127 Aquilegia coerulea Aquca_004_00127 I 0.000
mgf001395m Mimulus guttatus mgf001395m I 0.000
Cucsa.199800 Cucumis sativus Cucsa.199800 I 0.000
30055.m001550 Ricinus communis 30055.m001550 I 0.000
Pm029028 Prunus mume Pm029028 I 0.000
Pm001317 Prunus mume Pm001317 I 0.000
Cla008794 Citrullus lanatus Cla008794 I 0.000
Ca_07057 Cicer arietinum Ca_07057 I 0.000
TGA9 Vitis vinifera VIT_06s0080g00360 I 0.000
cassava13378.valid.m1 Manihot esculenta cassava13378.valid.m1 I 0.000
Eucgr.J00491 Eucalyptus grandis Eucgr.J00491 I 0.000
evm.TU.supercontig_32.14 Carica papaya evm.TU.supercontig_32.14 I 0.000
gene14220-v1.0-hybrid Fragaria vesca gene14220-v1.0-hybrid I 0.000
PK07387.1 Cannabis sativa PK07387.1 I 0.000
Thhalv10007490m.g Eutrema salsugineum Thhalv10007490m.g I 0.000
SapurV1A.0574s0080 Salix purpurea SapurV1A.0574s0080 I 0.000
SapurV1A.0374s0050 Salix purpurea SapurV1A.0374s0050 I 0.000
SapurV1A.0125s0260 Salix purpurea SapurV1A.0125s0260 I 0.000
SapurV1A.0009s1200 Salix purpurea SapurV1A.0009s1200 I 0.000
Pavir.J27823 Panicum virgatum Pavir.J27823 I 0.000
Pavir.J04905 Panicum virgatum Pavir.J04905 I 0.000
MDP0000301884 Malus domestica MDP0000301884 I 0.000
MDP0000250967 Malus domestica MDP0000250967 I 0.000
MDP0000145555 Malus domestica MDP0000145555 I 0.000
Lus10041475.g Linum usitatissimum Lus10041475.g I 0.000
Lus10034296.g Linum usitatissimum Lus10034296.g I 0.000
Gorai.006G111800 Gossypium raimondii Gorai.006G111800 I 0.000
gene21797-v1.0-hybrid Fragaria vesca gene21797-v1.0-hybrid I 0.000
TCM_041421 Theobroma cacao TCM_041421 I 0.000
Solyc10g080770.1 Solanum lycopersicum Solyc10g080770.1 I 0.000
BGIOSGA007726 Oryza indica BGIOSGA007726 I 0.000
OMERI02G08300 Oryza meridionalis OMERI02G08300 I 0.000
OLONG_010393 Oryza longistaminata OLONG_010393 I 0.000
OGLUM02G07240 Oryza glumaepatula OGLUM02G07240 I 0.000
OBART02G07230 Oryza barthii OBART02G07230 I 0.000
MTR_4g053250 Medicago truncatula MTR_4g053250 I 0.000
MTR_2g086420 Medicago truncatula MTR_2g086420 I 0.000
GSMUA_Achr9G27700_001 Musa acuminata GSMUA_Achr9G27700_001 I 0.000
GSMUA_Achr2G06770_001 Musa acuminata GSMUA_Achr2G06770_001 I 0.000
AMTR_s00031p00017860 Amborella trichopoda AMTR_s00031p00017860 I 0.000
GLYMA12G09430 Glycine max GLYMA12G09430 I 0.000
GLYMA11G19026 Glycine max GLYMA11G19026 I 0.000
fgenesh1_pm.C_scaffold_1000665 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000665 I 0.000
Bra031622 Brassica rapa Bra031622 I 0.000
Bra018634 Brassica rapa Bra018634 I 0.000
Bo8g112540 Brassica oleracea Bo8g112540 I 0.000
Bo5g008940 Brassica oleracea Bo5g008940 I 0.000
ONIVA02G08860 Oryza nivara ONIVA02G08860 I 0.000
OPUNC02G06400 Oryza punctata OPUNC02G06400 I 0.000
PRUPE_ppa004537mg Prunus persica PRUPE_ppa004537mg I 0.000
POPTR_0009s16590 Populus trichocarpa POPTR_0009s16590 I 0.000
Sb04g006500 Sorghum bicolor Sb04g006500 I 0.000
POPTR_0004s21360 Populus trichocarpa POPTR_0004s21360 I 0.000
POPTR_0003s19410 Populus trichocarpa POPTR_0003s19410 I 0.000
PRUPE_ppa019842mg Prunus persica PRUPE_ppa019842mg I 0.000
Solyc05g009660.2 Solanum lycopersicum Solyc05g009660.2 I 0.000
PGSC0003DMG402023696 Solanum tuberosum PGSC0003DMG402023696 I 0.000
Solyc06g074320.2 Solanum lycopersicum Solyc06g074320.2 I 0.000
PGSC0003DMG400012962 Solanum tuberosum PGSC0003DMG400012962 I 0.000
OS02G0194900 Oryza sativa OS02G0194900 I 0.000
ORGLA02G0067600 Oryza glaberrima ORGLA02G0067600 I 0.000
Traes_4AL_5E7F93445 Triticum aestivum Traes_4AL_5E7F93445 N 0.000
F775_05299 Aegilops tauschii F775_05299 N 0.000
Traes_4DS_0521C8ABF Triticum aestivum Traes_4DS_0521C8ABF N 0.000
Ca_16486 Cicer arietinum Ca_16486 N 0.000
GSMUA_Achr11G26170_001 Musa acuminata GSMUA_Achr11G26170_001 N 0.000
Gorai.009G086200 Gossypium raimondii Gorai.009G086200 N 0.000
MLOC_17690 Hordeum vulgare MLOC_17690 N 0.000
Traes_4BS_B7A8F8CD8 Triticum aestivum Traes_4BS_B7A8F8CD8 N 0.000
Cucsa.365420 Cucumis sativus Cucsa.365420 N 0.000
GSMUA_Achr10G10300_001 Musa acuminata GSMUA_Achr10G10300_001 N 0.000