BRC1 (Arabidopsis lyrata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 scaffold_302193.1 T344363_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_302193.1 TCP 137 299

Links

Other TCP family TFs
Other Arabidopsis lyrata TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRC1 Arabidopsis thaliana AT3G18550 I 0.976
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.971
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.971
Bra001710 Brassica rapa Bra001710 I 0.971
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.970
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.968
Bo5g117410 Brassica oleracea Bo5g117410 N 0.962
Bo3g071560 Brassica oleracea Bo3g071560 I 0.960
Bo1g117490 Brassica oleracea Bo1g117490 I 0.957
Bra037579 Brassica rapa Bra037579 I 0.957
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.880
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.873
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.870
TCM_012252 Theobroma cacao TCM_012252 I 0.865
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.858
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.857
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.854
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.852
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.852
Cla019282 Citrullus lanatus Cla019282 N 0.850
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.845
30174.m008721 Ricinus communis 30174.m008721 I 0.842
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.841
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.841
F775_01923 Aegilops tauschii F775_01923 I 0.839
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.838
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.838
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.838
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.837
MDP0000224810 Malus domestica MDP0000224810 N 0.837
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.836
Cla018797 Citrullus lanatus Cla018797 N 0.834
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.832
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.829
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.827
Si015230m.g Setaria italica Si015230m.g I 0.826
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.826
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.826
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.825
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.825
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.824
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.823
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.822
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.822
OS09G0410500 Oryza sativa OS09G0410500 I 0.822
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.822
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.822
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.822
Si038692m.g Setaria italica Si038692m.g I 0.822
OBART09G10040 Oryza barthii OBART09G10040 I 0.822