Si026501m.g (Setaria italica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Si026501m.g T344390_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.962 0.600
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.961 0.480
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.961 0.480
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.961 0.480
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.961 0.480
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.960 0.480
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.957 0.480
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.955 0.460
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.955 0.460
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.955 0.507
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.953 0.400
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.947 0.387
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.945 0.387
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.945 0.400
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.945 0.400
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.945 0.400
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.945 0.467
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.944 0.433
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.944 0.393
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.942 0.393
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.941 0.400
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.941 0.380
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.941 0.393
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.940 0.387
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.940 0.387
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.940 0.380
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.940 0.380
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.940 0.380
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.940 0.380
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.940 0.387
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.940 0.387
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.937 0.367
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.930 0.387
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.893 0.387
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.893 0.387
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si026501m TCP 48 212

Links

Other TCP family TFs
Other Setaria italica TFs

652 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000017117 Ailuropoda melanoleuca ENSAMEG00000017117 I 0.000
ENSAMEG00000018238 Ailuropoda melanoleuca ENSAMEG00000018238 I 0.000
Alligator_sinensis_CCG004214.1 Alligator sinensis Alligator_sinensis_CCG004214.1 I 0.000
Alligator_sinensis_CCG002397.1 Alligator sinensis Alligator_sinensis_CCG002397.1 I 0.000
ENSAPLG00000012143 Anas platyrhynchos ENSAPLG00000012143 I 0.000
ENSAPLG00000011965 Anas platyrhynchos ENSAPLG00000011965 I 0.000
MITF Anolis carolinensis ENSACAG00000013586 I 0.000
TFE3 Anolis carolinensis ENSACAG00000022140 I 0.000
TFEC Anolis carolinensis ENSACAG00000006672 I 0.000
Afo_R003542 Aptenodytes forsteri Afo_R003542 I 0.000
Afo_R011673 Aptenodytes forsteri Afo_R011673 I 0.000
ENSAMXG00000021026 Astyanax mexicanus ENSAMXG00000021026 I 0.000
ENSP00000265440-D1 Bos grunniens ENSP00000265440-D1 I 0.000
ENSBTAP00000053693-D1 Bos grunniens ENSBTAP00000053693-D1 I 0.000
MITF Bos taurus ENSBTAG00000006679 I 0.000
TFEC Bos taurus ENSBTAG00000014228 I 0.000
Brh_R009446 Buceros rhinoceros Brh_R009446 I 0.000
Brh_R012392 Buceros rhinoceros Brh_R012392 I 0.000
TFEC Callithrix jacchus ENSCJAG00000005199 I 0.000
MITF Callithrix jacchus ENSCJAG00000013260 I 0.000
Aan_R007225 Calypte anna Aan_R007225 I 0.000
Aan_R002066 Calypte anna Aan_R002066 I 0.000
MITF Canis familiaris ENSCAFG00000006496 I 0.000
TFEC Canis familiaris ENSCAFG00000003397 I 0.000
MITF Cavia porcellus ENSCPOG00000014963 I 0.000
TFE3 Cavia porcellus ENSCPOG00000012410 I 0.000
TFEC Cavia porcellus ENSCPOG00000012369 I 0.000
ENSCSAG00000011595 Chlorocebus sabaeus ENSCSAG00000011595 I 0.000
ENSCSAG00000010942 Chlorocebus sabaeus ENSCSAG00000010942 I 0.000
TFEC Choloepus hoffmanni ENSCHOG00000001149 I 0.000
mitfa Danio rerio ENSDARG00000003732 I 0.000
mitfb Danio rerio ENSDARG00000037833 I 0.000
tfec Danio rerio ENSDARG00000098745 I 0.000
MITF Dasypus novemcinctus ENSDNOG00000037006 I 0.000
ENSDNOG00000045240 Dasypus novemcinctus ENSDNOG00000045240 I 0.000
Mitf Dipodomys ordii ENSDORG00000003336 I 0.000
Tfec Dipodomys ordii ENSDORG00000004403 I 0.000
ENSDORG00000013258 Dipodomys ordii ENSDORG00000013258 I 0.000
TFEC Equus caballus ENSECAG00000013937 I 0.000
MITF Equus caballus ENSECAG00000005360 I 0.000
MITF Erinaceus europaeus ENSEEUG00000005163 I 0.000
MITF Felis catus ENSFCAG00000024419 I 0.000
TFEC Felis catus ENSFCAG00000027627 I 0.000
ENSFALG00000013383 Ficedula albicollis ENSFALG00000013383 I 0.000
ENSFALG00000010129 Ficedula albicollis ENSFALG00000010129 I 0.000
ENSGMOG00000007421 Gadus morhua ENSGMOG00000007421 I 0.000
ENSGMOG00000010175 Gadus morhua ENSGMOG00000010175 I 0.000
ENSGMOG00000009209 Gadus morhua ENSGMOG00000009209 I 0.000
ENSGALG00000009411 Gallus gallus ENSGALG00000009411 I 0.000
ENSGALG00000007679 Gallus gallus ENSGALG00000007679 I 0.000
mitfb Gasterosteus aculeatus ENSGACG00000003425 I 0.000
tfe3b Gasterosteus aculeatus ENSGACG00000010355 I 0.000
mitfa Gasterosteus aculeatus ENSGACG00000011875 I 0.000
tfec Gasterosteus aculeatus ENSGACG00000018910 I 0.000
Gfo_R014572 Geospiza fortis Gfo_R014572 I 0.000
Gfo_R005766 Geospiza fortis Gfo_R005766 I 0.000
MITF Gorilla gorilla ENSGGOG00000024338 I 0.000
TFEC Gorilla gorilla ENSGGOG00000009901 I 0.000
TFEC Homo sapiens ENSG00000105967 D 0.000
MITF Homo sapiens ENSG00000187098 D 0.000
ENSSTOG00000014237 Ictidomys tridecemlineatus ENSSTOG00000014237 I 0.000
ENSSTOG00000001224 Ictidomys tridecemlineatus ENSSTOG00000001224 I 0.000
ENSLACG00000011547 Latimeria chalumnae ENSLACG00000011547 I 0.000
ENSLACG00000008018 Latimeria chalumnae ENSLACG00000008018 I 0.000
ENSLOCG00000015941 Lepisosteus oculatus ENSLOCG00000015941 I 0.000
ENSLOCG00000010058 Lepisosteus oculatus ENSLOCG00000010058 I 0.000
MITF Loxodonta africana ENSLAFG00000023153 I 0.000
TFEC Loxodonta africana ENSLAFG00000017267 I 0.000
ENSP00000265440 Macaca fascicularis ENSP00000265440 I 0.000
ENSP00000391803 Macaca fascicularis ENSP00000391803 I 0.000
ENSMMUG00000016347 Macaca mulatta ENSMMUG00000016347 I 0.000
MITF Macaca mulatta ENSMMUG00000002100 I 0.000
ENSMEUG00000009307 Macropus eugenii ENSMEUG00000009307 I 0.000
TFEC Meleagris gallopavo ENSMGAG00000008979 I 0.000
MITF Meleagris gallopavo ENSMGAG00000009507 I 0.000
TFEC Microcebus murinus ENSMICG00000006995 I 0.000
ENSMICG00000002894 Microcebus murinus ENSMICG00000002894 I 0.000
MITF Monodelphis domestica ENSMODG00000003754 I 0.000
TFE3 Monodelphis domestica ENSMODG00000009925 I 0.000
ENSMODG00000015845 Monodelphis domestica ENSMODG00000015845 I 0.000
ENSMPUG00000007248 Mustela putorius furo ENSMPUG00000007248 I 0.000
ENSMPUG00000016972 Mustela putorius furo ENSMPUG00000016972 I 0.000
Tfe3 Mus musculus ENSMUSG00000000134 D 0.000
Mitf Mus musculus ENSMUSG00000035158 D 0.000
Myotis_brandtii_TFEC_10018991 Myotis brandtii Myotis_brandtii_TFEC_10018991 I 0.000
Myotis_brandtii_Mitf_10022588 Myotis brandtii Myotis_brandtii_Mitf_10022588 I 0.000
MITF Myotis lucifugus ENSMLUG00000002587 I 0.000
TFEC Myotis lucifugus ENSMLUG00000008952 I 0.000
ENSNLEG00000002357 Nomascus leucogenys ENSNLEG00000002357 I 0.000
ENSNLEG00000011480 Nomascus leucogenys ENSNLEG00000011480 I 0.000
ENSONIG00000020270 Oreochromis niloticus ENSONIG00000020270 I 0.000
ENSONIG00000016952 Oreochromis niloticus ENSONIG00000016952 I 0.000
ENSONIG00000016803 Oreochromis niloticus ENSONIG00000016803 I 0.000
ENSOANG00000012406 Ornithorhynchus anatinus ENSOANG00000012406 I 0.000
TFEC Ornithorhynchus anatinus ENSOANG00000014094 I 0.000
TFE3 Ornithorhynchus anatinus ENSOANG00000013574 I 0.000
TFEC Oryctolagus cuniculus ENSOCUG00000006292 I 0.000
MITF Oryctolagus cuniculus ENSOCUG00000002190 I 0.000
mitfb Oryzias latipes ENSORLG00000013461 I 0.000
tfec Oryzias latipes ENSORLG00000010461 I 0.000
mitfa Oryzias latipes ENSORLG00000003123 I 0.000
TFEC Otolemur garnettii ENSOGAG00000010066 I 0.000
MITF Otolemur garnettii ENSOGAG00000000043 I 0.000
ENSOARG00000001668 Ovis aries ENSOARG00000001668 I 0.000
ENSOARG00000009833 Ovis aries ENSOARG00000009833 I 0.000
TFEC Pan troglodytes ENSPTRG00000019610 I 0.000
MITF Pan troglodytes ENSPTRG00000015100 I 0.000
ENSPANG00000011565 Papio anubis ENSPANG00000011565 I 0.000
ENSPANG00000022367 Papio anubis ENSPANG00000022367 I 0.000
ENSPSIG00000015144 Pelodiscus sinensis ENSPSIG00000015144 I 0.000
ENSPSIG00000012120 Pelodiscus sinensis ENSPSIG00000012120 I 0.000
ENSPMAG00000004927 Petromyzon marinus ENSPMAG00000004927 I 0.000
ENSPFOG00000007171 Poecilia formosa ENSPFOG00000007171 I 0.000
ENSPFOG00000014522 Poecilia formosa ENSPFOG00000014522 I 0.000
ENSPFOG00000006677 Poecilia formosa ENSPFOG00000006677 I 0.000
Pvit_00330 Pogona vitticeps Pvit_00330 I 0.000
Pvit_16445 Pogona vitticeps Pvit_16445 I 0.000
Pvit_01233 Pogona vitticeps Pvit_01233 I 0.000
ENSPPYG00000017928 Pongo abelii ENSPPYG00000017928 I 0.000
ENSPPYG00000013725 Pongo abelii ENSPPYG00000013725 I 0.000
Mitf Rattus norvegicus ENSRNOG00000008658 I 0.000
Tfe3 Rattus norvegicus ENSRNOG00000009605 I 0.000
Tfec Rattus norvegicus ENSRNOG00000061595 I 0.000
ENSSHAG00000012198 Sarcophilus harrisii ENSSHAG00000012198 I 0.000
ENSSHAG00000017522 Sarcophilus harrisii ENSSHAG00000017522 I 0.000
MITF Sorex araneus ENSSARG00000002538 I 0.000
ENSSSCG00000016637 Sus scrofa ENSSSCG00000016637 I 0.000
MITF Taeniopygia guttata ENSTGUG00000009847 I 0.000
TFEC Taeniopygia guttata ENSTGUG00000005289 I 0.000
mitfb Takifugu rubripes ENSTRUG00000012080 I 0.000
mitfa Takifugu rubripes ENSTRUG00000001600 I 0.000
ENSTSYG00000008234 Tarsius syrichta ENSTSYG00000008234 I 0.000
ENSTSYG00000011324 Tarsius syrichta ENSTSYG00000011324 I 0.000
mitfa Tetraodon nigroviridis ENSTNIG00000007360 I 0.000
mitfb Tetraodon nigroviridis ENSTNIG00000012564 I 0.000
tfec Tetraodon nigroviridis ENSTNIG00000018518 I 0.000
MITF Tupaia belangeri ENSTBEG00000017713 I 0.000
TFEC Tursiops truncatus ENSTTRG00000005875 I 0.000
MITF Tursiops truncatus ENSTTRG00000007072 I 0.000
Tal_R000725 Tyto alba Tal_R000725 I 0.000
Tal_R001329 Tyto alba Tal_R001329 I 0.000
TFEC Vicugna pacos ENSVPAG00000005459 I 0.000
mitf.L Xenopus laevis XB-GENE-6252679 I 0.000
mitf.S Xenopus laevis XB-GENE-6464338 I 0.000
mitf Xenopus tropicalis XB-GENE-484962 I 0.000
ENSXMAG00000016472 Xiphophorus maculatus ENSXMAG00000016472 I 0.000
ENSXMAG00000009146 Xiphophorus maculatus ENSXMAG00000009146 I 0.000
ENSXMAG00000002200 Xiphophorus maculatus ENSXMAG00000002200 I 0.000