Si038692m.g (Setaria italica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Si038692m.g T344395_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.938 0.596
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si038692m TCP 114 270

Links

Other TCP family TFs
Other Setaria italica TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.975
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.974
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.952
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.952
OBART03G31290 Oryza barthii OBART03G31290 I 0.952
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.952
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.950
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.949
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.938
TB1 Oryza sativa OS03G0706500 D 0.938
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.938
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.938
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.938
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.937
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.937
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.934
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.934
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.934
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.933
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.927
AC190734.2_FG003 Zea mays AC190734.2_FG003 I 0.912
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.867
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.863
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.848
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.848
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.848
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.847
OS09G0410500 Oryza sativa OS09G0410500 I 0.847
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.847
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.847
OBART09G10040 Oryza barthii OBART09G10040 I 0.847
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.847
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.846
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.844
MDP0000224810 Malus domestica MDP0000224810 N 0.842
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.841
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.840
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.840
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.840
Si033183m.g Setaria italica Si033183m.g I 0.839
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.839
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.839
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.839
OB03G38320 Oryza brachyantha OB03G38320 I 0.839
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.837
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.837
Si015230m.g Setaria italica Si015230m.g I 0.836
Bo5g117410 Brassica oleracea Bo5g117410 N 0.835
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.835
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.834
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.834
mgf026636m Mimulus guttatus mgf026636m I 0.830
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.830
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.830
Pm030202 Prunus mume Pm030202 I 0.830
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.830
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.829
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.829
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.828
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.828
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.828
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.828
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.827
Bo3g071560 Brassica oleracea Bo3g071560 I 0.827
F775_01923 Aegilops tauschii F775_01923 I 0.827
BRC1 Arabidopsis thaliana AT3G18550 I 0.826
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.826
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.826
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.826
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.826
OS08G0432300 Oryza sativa OS08G0432300 I 0.826
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.826
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.825
Cla019282 Citrullus lanatus Cla019282 N 0.825
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.824
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.823
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.823
Bra001710 Brassica rapa Bra001710 I 0.823
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.822