Solyc01g103780.2 (Solanum lycopersicum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Solyc01g103780.2 T344398_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.971 0.714
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.968 0.723
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.966 0.679
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.966 0.679
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.965 0.679
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.965 0.679
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.963 0.670
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.963 0.670
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.963 0.670
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.963 0.670
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.953 0.571
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.951 0.554
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.951 0.554
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.951 0.554
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.951 0.554
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.951 0.554
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.951 0.536
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.950 0.562
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.949 0.545
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.948 0.562
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.947 0.518
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.946 0.518
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.946 0.571
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.946 0.571
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.946 0.571
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.945 0.509
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.945 0.509
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.945 0.509
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.945 0.509
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.944 0.554
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.943 0.527
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.941 0.509
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.940 0.500
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.894 0.482
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.894 0.482
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc01g103780.2.1 TCP 140 350

Links

Other TCP family TFs
Other Solanum lycopersicum TFs

658 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMXG00000012547 Astyanax mexicanus ENSAMXG00000012547 I 0.000
ENSAPLG00000012761 Anas platyrhynchos ENSAPLG00000012761 I 0.000
ZBTB17 Bos taurus ENSBTAG00000018730 I 0.000
ZBTB17 Canis familiaris ENSCAFG00000016122 I 0.000
ZBTB17 Callithrix jacchus ENSCJAG00000008499 I 0.000
ZBTB17 Cavia porcellus ENSCPOG00000014042 I 0.000
zbtb17 Danio rerio ENSDARG00000074548 I 0.000
ZBTB17 Dasypus novemcinctus ENSDNOG00000001983 I 0.000
ZBTB17 Equus caballus ENSECAG00000024826 I 0.000
ENSFALG00000003542 Ficedula albicollis ENSFALG00000003542 I 0.000
ZBTB17 Homo sapiens ENSG00000116809 D 0.000
zbtb17 Gasterosteus aculeatus ENSGACG00000005273 I 0.000
ENSGALG00000003669 Gallus gallus ENSGALG00000003669 I 0.000
ZBTB17 Gorilla gorilla ENSGGOG00000012058 I 0.000
ENSGMOG00000008387 Gadus morhua ENSGMOG00000008387 I 0.000
ZBTB17 Loxodonta africana ENSLAFG00000004528 I 0.000
ENSMEUG00000000608 Macropus eugenii ENSMEUG00000000608 I 0.000
ZBTB17 Myotis lucifugus ENSMLUG00000025202 I 0.000
ZBTB17 Macaca mulatta ENSMMUG00000008031 I 0.000
ZBTB17 Monodelphis domestica ENSMODG00000003391 I 0.000
Zbtb17 Mus musculus ENSMUSG00000006215 D 0.000
ENSNLEG00000007658 Nomascus leucogenys ENSNLEG00000007658 I 0.000
ZBTB17 Ornithorhynchus anatinus ENSOANG00000008832 I 0.000
ZBTB17 Oryctolagus cuniculus ENSOCUG00000026236 I 0.000
ZBTB17 Otolemur garnettii ENSOGAG00000005075 I 0.000
ENSONIG00000006553 Oreochromis niloticus ENSONIG00000006553 I 0.000
ZBTB17 Ochotona princeps ENSOPRG00000015846 I 0.000
ENSP00000364885 Macaca fascicularis ENSP00000364885 I 0.000
ENSPANG00000015972 Papio anubis ENSPANG00000015972 I 0.000
ZBTB17 Procavia capensis ENSPCAG00000009449 I 0.000
ENSPFOG00000015192 Poecilia formosa ENSPFOG00000015192 I 0.000
ENSPPYG00000001833 Pongo abelii ENSPPYG00000001833 I 0.000
ZBTB17 Pan troglodytes ENSPTRG00000000211 I 0.000
ZBTB17 Pteropus vampyrus ENSPVAG00000013802 I 0.000
Zbtb17 Rattus norvegicus ENSRNOG00000010436 I 0.000
ZBTB17 Sorex araneus ENSSARG00000006626 I 0.000
ENSSTOG00000005696 Ictidomys tridecemlineatus ENSSTOG00000005696 I 0.000
ZBTB17 Taeniopygia guttata ENSTGUG00000002039 I 0.000
zbtb17 Tetraodon nigroviridis ENSTNIG00000010902 I 0.000
zbtb17 Takifugu rubripes ENSTRUG00000003277 I 0.000
Myotis_brandtii_ZBTB17_10010507 Myotis brandtii Myotis_brandtii_ZBTB17_10010507 I 0.000
Ogr02991 Ophisaurus gracilis Ogr02991 I 0.000
Pvit_06232 Pogona vitticeps Pvit_06232 I 0.000
zbtb17.S Xenopus laevis XB-GENE-6254499 I 0.000
zbtb17 Xenopus tropicalis XB-GENE-940673 I 0.000