CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc06g069240.1
(
Solanum lycopersicum
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
Solyc06g069240.1
T344417_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc06g069240.1.1
TCP
113
276
SSNKDRHSKINTARGPRDRRMRLSLDAARKFFRLQDLLGFDKASKTVEWLLTQSDSAIEELVAAKGNDAQVAQQTSCNTPTTTTGIGAICASNSISESCEVISGTDETSSNDKNKETAQDEEKKKRKKVVNTARRAVLEPLTKESRNQARARARERTKSKKMSQ
Links
Other
TCP
family TFs
Other
Solanum lycopersicum
TFs
90 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
bZIP911
Antirrhinum majus
CAA74023.1
D
0.000
AtbZIP44
Arabidopsis lyrata
scaffold_202483.1
I
0.000
BZIP44
Arabidopsis thaliana
AT1G75390
D
0.000
Bostr.3288s0189
Boechera stricta
Bostr.3288s0189
I
0.000
BRADI3G22040
Brachypodium distachyon
BRADI3G22040
N
0.000
Bo6g086380
Brassica oleracea
Bo6g086380
I
0.000
Bo2g083760
Brassica oleracea
Bo2g083760
I
0.000
Bo8g079020
Brassica oleracea
Bo8g079020
N
0.000
Bra036025
Brassica rapa
Bra036025
N
0.000
Bra003755
Brassica rapa
Bra003755
I
0.000
Bra008192
Brassica rapa
Bra008192
I
0.000
Ciclev10002731m.g
Citrus clementina
Ciclev10002731m.g
N
0.000
orange1.1g041765m.g
Citrus sinensis
orange1.1g041765m.g
N
0.000
Thhalv10019604m.g
Eutrema salsugineum
Thhalv10019604m.g
I
0.000
GLYMA14G07800
Glycine max
GLYMA14G07800
N
0.000
GLYMA17G37180
Glycine max
GLYMA17G37180
N
0.000
LPERR08G10100
Leersia perrieri
LPERR08G10100
N
0.000
Lus10024279.g
Linum usitatissimum
Lus10024279.g
N
0.000
OBART08G12060
Oryza barthii
OBART08G12060
N
0.000
OB08G20490
Oryza brachyantha
OB08G20490
N
0.000
ORGLA08G0106400
Oryza glaberrima
ORGLA08G0106400
N
0.000
OGLUM08G12880
Oryza glumaepatula
OGLUM08G12880
N
0.000
BGIOSGA028522
Oryza indica
BGIOSGA028522
N
0.000
OLONG_022621
Oryza longistaminata
OLONG_022621
N
0.000
OMERI08G10040
Oryza meridionalis
OMERI08G10040
N
0.000
ONIVA08G12360
Oryza nivara
ONIVA08G12360
N
0.000
ORUFI08G13590
Oryza rufipogon
ORUFI08G13590
N
0.000