CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2BS_03909B330
(
Triticum aestivum
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
Traes_2BS_03909B330
T344458_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2BS_03909B330.1
TCP
1
103
MRLSVGVAREFFALQDLLGFDKASKTVEWLLTQSKPAIDRLADGTPGAAAAAAGPSKEKGEGATSSGTGCFEDAREEEHDVRDLMKGIGGEGELDWFMSEAAA
Links
Other
TCP
family TFs
Other
Triticum aestivum
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2DS_4C8E5F416
Triticum aestivum
Traes_2DS_4C8E5F416
N
0.959
MLOC_58142
Hordeum vulgare
MLOC_58142
I
0.937
AC234521.1_FG006
Zea mays
AC234521.1_FG006
N
0.930
GRMZM2G170232
Zea mays
GRMZM2G170232
N
0.917
GRMZM2G359599
Zea mays
GRMZM2G359599
N
0.917
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
0.911
GRMZM2G135461
Zea mays
GRMZM2G135461
N
0.910
GRMZM2G088440
Zea mays
GRMZM2G088440
N
0.902
OB03G38320
Oryza brachyantha
OB03G38320
I
0.888
F775_01923
Aegilops tauschii
F775_01923
I
0.875
GRMZM2G060319
Zea mays
GRMZM2G060319
I
0.858
Sb07g021140
Sorghum bicolor
Sb07g021140
I
0.846
Si015230m.g
Setaria italica
Si015230m.g
I
0.845
GRMZM2G110242
Zea mays
GRMZM2G110242
I
0.844
OMERI09G07770
Oryza meridionalis
OMERI09G07770
I
0.838
GRMZM2G166687
Zea mays
GRMZM2G166687
I
0.837
OPUNC09G08520
Oryza punctata
OPUNC09G08520
I
0.837
OBART08G15630
Oryza barthii
OBART08G15630
N
0.837
Traes_2DL_01D9C842D
Triticum aestivum
Traes_2DL_01D9C842D
I
0.837
ORUFI09G10660
Oryza rufipogon
ORUFI09G10660
I
0.836
Traes_5DL_46A3B0DAB1
Triticum aestivum
Traes_5DL_46A3B0DAB1
I
0.836
OS09G0410500
Oryza sativa
OS09G0410500
I
0.836
BGIOSGA030744
Oryza indica
BGIOSGA030744
I
0.836
ONIVA09G09540
Oryza nivara
ONIVA09G09540
I
0.836
OBART09G10040
Oryza barthii
OBART09G10040
I
0.836
OGLUM09G10300
Oryza glumaepatula
OGLUM09G10300
I
0.836
LPERR08G12880
Leersia perrieri
LPERR08G12880
I
0.830
GRMZM2G062711
Zea mays
GRMZM2G062711
I
0.828
GRMZM2G064628
Zea mays
GRMZM2G064628
I
0.828
GRMZM2G424261
Zea mays
GRMZM2G424261
N
0.826
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
0.826
LPERR09G06870
Leersia perrieri
LPERR09G06870
I
0.826
Pavir.Fa00870
Panicum virgatum
Pavir.Fa00870
I
0.824
Pavir.Bb02154
Panicum virgatum
Pavir.Bb02154
I
0.823