BRC2 (Vitis vinifera)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 VIT_01s0011g02920 T344487_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.897 0.418
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH

DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.849 0.405
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC

GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.846 0.399
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_01s0011g02920.t01 TCP 63 220

Links

Other TCP family TFs
Other Vitis vinifera TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCP1 Arabidopsis thaliana AT1G67260 D 0.849
PK19717.1 Cannabis sativa PK19717.1 D 0.846
PK12240.1 Cannabis sativa PK12240.1 D 0.897
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.910
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.867
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.902
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.831
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.826
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.902
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.902
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.838
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.847
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.948
mgf024687m Mimulus guttatus mgf024687m I 0.837
mgf022233m Mimulus guttatus mgf022233m I 0.838
30174.m008721 Ricinus communis 30174.m008721 I 0.855
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.883
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.932
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.895
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.887
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.904
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.890
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.914
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.856
mgf019480m Mimulus guttatus mgf019480m I 0.869
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.870
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.852
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.854
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.941
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.882
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.870
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.856
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.856
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.841
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.867
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.876
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.948
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.847
MDP0000272980 Malus domestica MDP0000272980 I 0.918
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.828
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.935
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.867
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.916
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.876
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.949
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.887
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.868
MDP0000173048 Malus domestica MDP0000173048 I 0.927
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.862
BRC2 Arabidopsis thaliana AT1G68800 I 0.909
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.871
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.885
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.853
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.875
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.881
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.878
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.923
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.851
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.867
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.931
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.886
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.871
Bo2g055640 Brassica oleracea Bo2g055640 I 0.822
Bo2g061250 Brassica oleracea Bo2g061250 I 0.898
Bo6g099040 Brassica oleracea Bo6g099040 I 0.846
Bo6g103670 Brassica oleracea Bo6g103670 I 0.850
Bra004097 Brassica rapa Bra004097 I 0.843
Bra004212 Brassica rapa Bra004212 I 0.851
Bra038350 Brassica rapa Bra038350 I 0.898
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.859
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.909
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.874
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.924
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.940
mgf026636m Mimulus guttatus mgf026636m I 0.895
TCM_011874 Theobroma cacao TCM_011874 I 0.943
TCM_019518 Theobroma cacao TCM_019518 I 0.872
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.843
Cla002355 Citrullus lanatus Cla002355 I 0.906
Cla007227 Citrullus lanatus Cla007227 I 0.896
Cla016709 Citrullus lanatus Cla016709 I 0.886
Pm015499 Prunus mume Pm015499 I 0.851
Pm029002 Prunus mume Pm029002 I 0.935
Pm030202 Prunus mume Pm030202 I 0.837
29738.m001041 Ricinus communis 29738.m001041 I 0.933
30167.m000856 Ricinus communis 30167.m000856 I 0.885
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.918
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.884
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.876
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.859
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.837
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.935
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.852
Solyc03g045030.1 Solanum lycopersicum Solyc03g045030.1 I 0.841
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.872
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.931
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.830
MDP0000224810 Malus domestica MDP0000224810 N 0.859
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.830