Pm011369 (Prunus mume)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pm011369 T344557_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP4
M02501_2.00
Arabidopsis thaliana
GGGACCAC

GTGGTCCC
PBM
Weirauch et al.(2014)
pTH8084
0.946 0.449
TCP4
M02514_2.00
Arabidopsis lyrata
BKGGGACCAC

GTGGTCCCMV
PBM
Weirauch et al.(2014)
pTH9313
0.946 0.449
TCP3
M02500_2.00
Arabidopsis thaliana
NDGGMCCACN

NGTGGKCCHN
PBM
Weirauch et al.(2014)
pTH8835
0.940 0.422
TCP3
M07274_2.00
Arabidopsis thaliana
DHNGGGACCACH

DGTGGTCCCNDH
Dap-seq
OMalley et al.(2016)
TCP3_colamp_a
0.940 0.422
TCP3
M07275_2.00
Arabidopsis thaliana
DNBGGGACCACHN

NDGTGGTCCCVNH
Dap-seq
OMalley et al.(2016)
TCP3_col
0.940 0.422
OS01G0213800
M11398_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF5_01
0.938 0.449
LjT20A21.20.nc
M02519_2.00
Lotus japonicus
GGGACCAY

RTGGTCCC
PBM
Weirauch et al.(2014)
pTH9202
0.884 0.340
TCP2
M02503_2.00
Arabidopsis thaliana
NBGGKMCCVN

NBGGKMCCVN
PBM
Weirauch et al.(2014)
pTH8198
0.884 0.333
TCP2
M02508_2.00
Arabidopsis lyrata
GGSMCCAC

GTGGKSCC
PBM
Weirauch et al.(2014)
pTH9231
0.875 0.327
PK10344.1
M01313_2.00
Cannabis sativa
GGGACCAC

GTGGTCCC
PBM
Lambert et al.(2019)
pTH11464
0.851 0.313
TCP5
M02510_2.00
Arabidopsis lyrata
GGGACCAC

GTGGTCCC
PBM
Weirauch et al.(2014)
pTH9233
0.838 0.293
TCP13
M07283_2.00
Arabidopsis thaliana
GTGGGGACCACWD

HWGTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
PTF1_col_a
0.832 0.333
TCP13
M07284_2.00
Arabidopsis thaliana
NNBGGGACCACHN

NDGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
PTF1_colamp_a
0.832 0.333
TCP5
M02505_2.00
Arabidopsis thaliana
GGGACCAY

RTGGTCCC
PBM
Weirauch et al.(2014)
pTH7523
0.832 0.327
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm011369 TCP 43 301

Links

Other TCP family TFs
Other Prunus mume TFs

397 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL005480 Aedes aegypti AAEL005480 I 0.000
AAEL011943 Aedes aegypti AAEL011943 I 0.000
AALB005366 Anopheles albimanus AALB005366 I 0.000
AARA008572 Anopheles arabiensis AARA008572 I 0.000
ACOM024305 Anopheles coluzzii ACOM024305 I 0.000
ACUA017851 Anopheles culicifacies ACUA017851 I 0.000
ADAC007300 Anopheles darlingi ADAC007300 I 0.000
ADIR003682 Anopheles dirus ADIR003682 I 0.000
AEPI006491 Anopheles epiroticus AEPI006491 I 0.000
AFAF016565 Anopheles farauti AFAF016565 I 0.000
AFUN000350 Anopheles funestus AFUN000350 I 0.000
AGAP006699 Anopheles gambiae AGAP006699 I 0.000
AMEC007487 Anopheles melas AMEC007487 I 0.000
AMIN010131 Anopheles minimus AMIN010131 I 0.000
AQUA004803 Anopheles quadriannulatus AQUA004803 I 0.000
ASTEI10025 Anopheles stephensi ASTEI10025 I 0.000
Cflo_02884--XP_393948.3_APIME Camponotus floridanus Cflo_02884--XP_393948.3_APIME N 0.000
CLEC003006 Cimex lectularius CLEC003006 N 0.000
CLEC009505 Cimex lectularius CLEC009505 I 0.000
CPIJ004757 Culex quinquefasciatus CPIJ004757 I 0.000
CpipJ_CPIJ004757 Culex pipiens CpipJ_CPIJ004757 I 0.000
h Drosophila melanogaster FBgn0001168 D 0.000
h Drosophila virilis FBgn0013115 I 0.000
h Drosophila simulans FBgn0016346 I 0.000
h Drosophila willistoni FBgn0067109 I 0.000
GA19636 Drosophila pseudoobscura FBgn0079632 I 0.000
GF24345 Drosophila ananassae FBgn0101339 I 0.000
GG14338 Drosophila erecta FBgn0106599 I 0.000
GI12920 Drosophila mojavensis FBgn0135677 I 0.000
GL10333 Drosophila persimilis FBgn0147943 I 0.000
GM25080 Drosophila sechellia FBgn0179941 I 0.000
GE20765 Drosophila yakuba FBgn0238065 I 0.000
GB47799 Apis mellifera GB47799 I 0.000
HHAL004853-PA Halyomorpha halys HHAL004853-PA I 0.000
HMEL008426 Heliconius melpomene HMEL008426 I 0.000
HMEL011919 Heliconius melpomene HMEL011919 N 0.000
Hsal_02414--XP_393948.3_APIME Harpegnathos saltator Hsal_02414--XP_393948.3_APIME N 0.000
L798_01589 Zootermopsis nevadensis L798_01589 I 0.000
L798_01590 Zootermopsis nevadensis L798_01590 I 0.000
LCUP010072 Lucilia cuprina LCUP010072 I 0.000
LDEC021054 Leptinotarsa decemlineata LDEC021054 I 0.000
LLOJ000067 Lutzomyia longipalpis LLOJ000067 I 0.000
MCINX004301 Melitaea cinxia MCINX004301 I 0.000
MCINX006807 Melitaea cinxia MCINX006807 N 0.000
MDOA005593 Musca domestica MDOA005593 I 0.000
NV15013 Nasonia vitripennis NV15013 I 0.000
PHUM045420 Pediculus humanus PHUM045420 I 0.000
RPRC000496 Rhodnius prolixus RPRC000496 I 0.000
TC012851 Tribolium castaneum TC012851 I 0.000
YQE_12940 Dendroctonus ponderosae YQE_12940 I 0.000