Pm011369 (Prunus mume)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pm011369 T344557_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP4
M02501_2.00
Arabidopsis thaliana
GGGACCAC

GTGGTCCC
PBM
Weirauch et al.(2014)
pTH8084
0.946 0.449
TCP4
M02514_2.00
Arabidopsis lyrata
BKGGGACCAC

GTGGTCCCMV
PBM
Weirauch et al.(2014)
pTH9313
0.946 0.449
TCP3
M02500_2.00
Arabidopsis thaliana
NDGGMCCACN

NGTGGKCCHN
PBM
Weirauch et al.(2014)
pTH8835
0.940 0.422
TCP3
M07274_2.00
Arabidopsis thaliana
DHNGGGACCACH

DGTGGTCCCNDH
Dap-seq
OMalley et al.(2016)
TCP3_colamp_a
0.940 0.422
TCP3
M07275_2.00
Arabidopsis thaliana
DNBGGGACCACHN

NDGTGGTCCCVNH
Dap-seq
OMalley et al.(2016)
TCP3_col
0.940 0.422
OS01G0213800
M11398_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF5_01
0.938 0.449
LjT20A21.20.nc
M02519_2.00
Lotus japonicus
GGGACCAY

RTGGTCCC
PBM
Weirauch et al.(2014)
pTH9202
0.884 0.340
TCP2
M02503_2.00
Arabidopsis thaliana
NBGGKMCCVN

NBGGKMCCVN
PBM
Weirauch et al.(2014)
pTH8198
0.884 0.333
TCP2
M02508_2.00
Arabidopsis lyrata
GGSMCCAC

GTGGKSCC
PBM
Weirauch et al.(2014)
pTH9231
0.875 0.327
PK10344.1
M01313_2.00
Cannabis sativa
GGGACCAC

GTGGTCCC
PBM
Lambert et al.(2019)
pTH11464
0.851 0.313
TCP5
M02510_2.00
Arabidopsis lyrata
GGGACCAC

GTGGTCCC
PBM
Weirauch et al.(2014)
pTH9233
0.838 0.293
TCP13
M07283_2.00
Arabidopsis thaliana
GTGGGGACCACWD

HWGTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
PTF1_col_a
0.832 0.333
TCP13
M07284_2.00
Arabidopsis thaliana
NNBGGGACCACHN

NDGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
PTF1_colamp_a
0.832 0.333
TCP5
M02505_2.00
Arabidopsis thaliana
GGGACCAY

RTGGTCCC
PBM
Weirauch et al.(2014)
pTH7523
0.832 0.327
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm011369 TCP 43 301

Links

Other TCP family TFs
Other Prunus mume TFs

Invalid Input OrderBy

397 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action