Pm024934 (Prunus mume)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pm024934 T344564_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.842 0.300
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.842 0.300
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.841 0.315
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.837 0.315
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.833 0.308
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.830 0.323
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.830 0.323
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.830 0.323
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.830 0.323
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm024934 TCP 92 225

Links

Other TCP family TFs
Other Prunus mume TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_002_00568 Aquilegia coerulea Aquca_002_00568 I 0.853
Solyc06g070900.2 Solanum lycopersicum Solyc06g070900.2 I 0.850
PGSC0003DMG400033078 Solanum tuberosum PGSC0003DMG400033078 I 0.849
Carubv10020411m.g Capsella rubella Carubv10020411m.g I 0.848
Eucgr.B00471 Eucalyptus grandis Eucgr.B00471 I 0.847
GLYMA04G33771 Glycine max GLYMA04G33771 I 0.847
scaffold_202121.1 Arabidopsis lyrata scaffold_202121.1 I 0.847
VIT_01s0026g02200 Vitis vinifera VIT_01s0026g02200 I 0.846
gene25985-v1.0-hybrid Fragaria vesca gene25985-v1.0-hybrid I 0.846
Cucsa.112620 Cucumis sativus Cucsa.112620 I 0.846
mgf018304m Mimulus guttatus mgf018304m I 0.846
MDP0000242185 Malus domestica MDP0000242185 I 0.846
orange1.1g014326m.g Citrus sinensis orange1.1g014326m.g I 0.846
30093.m000364 Ricinus communis 30093.m000364 I 0.845
cassava17538.valid.m1 Manihot esculenta cassava17538.valid.m1 I 0.844
cassava35141.m1 Manihot esculenta cassava35141.m1 I 0.844
PRUPE_ppa006389mg Prunus persica PRUPE_ppa006389mg I 0.844
30147.m014114 Ricinus communis 30147.m014114 I 0.844
MDP0000531313 Malus domestica MDP0000531313 I 0.844
MDP0000210785 Malus domestica MDP0000210785 I 0.844
MTR_2g006150 Medicago truncatula MTR_2g006150 I 0.843
MDP0000877369 Malus domestica MDP0000877369 I 0.843
AtTCP14 Vitis vinifera VIT_17s0000g06020 I 0.842
PRUPE_ppa017864mg Prunus persica PRUPE_ppa017864mg I 0.842
TCM_013943 Theobroma cacao TCM_013943 I 0.842
Bostr.18473s0195 Boechera stricta Bostr.18473s0195 I 0.842
Pm006518 Prunus mume Pm006518 I 0.842
GLYMA17G10760 Glycine max GLYMA17G10760 I 0.842
Gorai.001G072200 Gossypium raimondii Gorai.001G072200 I 0.842
AtTCP14 Arabidopsis lyrata fgenesh2_kg.5__1118__AT3G47620.1 I 0.842
TCP22 Arabidopsis thaliana AT1G72010 D 0.842
Bo3g134720 Brassica oleracea Bo3g134720 I 0.842
PGSC0003DMG400000597 Solanum tuberosum PGSC0003DMG400000597 I 0.841
SapurV1A.0032s0340 Salix purpurea SapurV1A.0032s0340 I 0.841
Solyc03g116320.2 Solanum lycopersicum Solyc03g116320.2 I 0.841
Cla019409 Citrullus lanatus Cla019409 I 0.841
MDP0000319941 Malus domestica MDP0000319941 I 0.841
Ciclev10020275m.g Citrus clementina Ciclev10020275m.g I 0.841
Gorai.012G166500 Gossypium raimondii Gorai.012G166500 I 0.841
GLYMA06G20660 Glycine max GLYMA06G20660 I 0.841
GLYMA05G01131 Glycine max GLYMA05G01131 I 0.841
POPTR_0011s05430 Populus trichocarpa POPTR_0011s05430 I 0.841
Gorai.008G192400 Gossypium raimondii Gorai.008G192400 I 0.841
POPTR_0004s23080 Populus trichocarpa POPTR_0004s23080 I 0.841
PK12736.1 Cannabis sativa PK12736.1 D 0.841
Cucsa.197650 Cucumis sativus Cucsa.197650 I 0.841
TCM_006249 Theobroma cacao TCM_006249 I 0.840
estExt_fgenesh1_pg.C_4460008 Physcomitrella patens estExt_fgenesh1_pg.C_4460008 I 0.840
GLYMA01G05410 Glycine max GLYMA01G05410 I 0.840
SapurV1A.0470s0110 Salix purpurea SapurV1A.0470s0110 I 0.839
Gorai.002G215000 Gossypium raimondii Gorai.002G215000 I 0.839
cassava16176.m1 Manihot esculenta cassava16176.m1 I 0.839
Carubv10022457m.g Capsella rubella Carubv10022457m.g I 0.839
fgenesh2_kg.2__549__AT1G58100.1 Arabidopsis lyrata fgenesh2_kg.2__549__AT1G58100.1 I 0.839
MTR_5g039600 Medicago truncatula MTR_5g039600 I 0.839
Eucgr.B03427 Eucalyptus grandis Eucgr.B03427 I 0.839
Cla018905 Citrullus lanatus Cla018905 I 0.839
Cla023287 Citrullus lanatus Cla023287 I 0.839
Cagra.4006s0026 Capsella grandiflora Cagra.4006s0026 I 0.839
estExt_fgenesh1_pg.C_3560021 Physcomitrella patens estExt_fgenesh1_pg.C_3560021 I 0.838
VIT_18s0117g00340 Vitis vinifera VIT_18s0117g00340 I 0.838
Ca_15357 Cicer arietinum Ca_15357 I 0.838
evm.TU.supercontig_30.48 Carica papaya evm.TU.supercontig_30.48 I 0.837
Thhalv10011054m.g Eutrema salsugineum Thhalv10011054m.g I 0.837
Gorai.N023500 Gossypium raimondii Gorai.N023500 I 0.837
TCP8 Arabidopsis thaliana AT1G58100 D 0.837
Bra027886 Brassica rapa Bra027886 I 0.836
Bo2g064390 Brassica oleracea Bo2g064390 I 0.836
BRADI2G59240 Brachypodium distachyon BRADI2G59240 I 0.836
Bo6g095270 Brassica oleracea Bo6g095270 I 0.836
Bostr.10273s0152 Boechera stricta Bostr.10273s0152 I 0.835
BGIOSGA005085 Oryza indica BGIOSGA005085 I 0.835
cassava39094.m1 Manihot esculenta cassava39094.m1 I 0.835
OMERI01G39320 Oryza meridionalis OMERI01G39320 I 0.835
OGLUM01G46570 Oryza glumaepatula OGLUM01G46570 I 0.835
29813.m001457 Ricinus communis 29813.m001457 I 0.835
GSMUA_Achr7G17990_001 Musa acuminata GSMUA_Achr7G17990_001 I 0.834
Bra004407 Brassica rapa Bra004407 I 0.834
Thhalv10023507m.g Eutrema salsugineum Thhalv10023507m.g I 0.834
TRAES3BF146000020CFD_g Triticum aestivum TRAES3BF146000020CFD_g I 0.834
TCM_011752 Theobroma cacao TCM_011752 I 0.834
Thhalv10018834m.g Eutrema salsugineum Thhalv10018834m.g I 0.833
TCP14 Arabidopsis thaliana AT3G47620 D 0.833
GSMUA_Achr6G02720_001 Musa acuminata GSMUA_Achr6G02720_001 I 0.833
Bo6g110290 Brassica oleracea Bo6g110290 I 0.833
chr6.CM0885.180.nc Lotus japonicus chr6.CM0885.180.nc I 0.833
mgf025746m Mimulus guttatus mgf025746m I 0.833
orange1.1g008187m.g Citrus sinensis orange1.1g008187m.g I 0.833
GLYMA02G11781 Glycine max GLYMA02G11781 I 0.833
GLYMA12G28970 Glycine max GLYMA12G28970 I 0.833
GLYMA16G00580 Glycine max GLYMA16G00580 I 0.833
LPERR01G36850 Leersia perrieri LPERR01G36850 I 0.833
Ciclev10000702m.g Citrus clementina Ciclev10000702m.g I 0.833
Bostr.30057s0082 Boechera stricta Bostr.30057s0082 I 0.833
OPUNC06G07840 Oryza punctata OPUNC06G07840 I 0.833
Ca_00040 Cicer arietinum Ca_00040 I 0.833
cassava15299.m1 Manihot esculenta cassava15299.m1 I 0.833
Ca_18764 Cicer arietinum Ca_18764 I 0.833
LPERR06G07490 Leersia perrieri LPERR06G07490 I 0.832
ONIVA06G09330 Oryza nivara ONIVA06G09330 I 0.832
Gorai.007G036800 Gossypium raimondii Gorai.007G036800 I 0.832
BGIOSGA022577 Oryza indica BGIOSGA022577 I 0.832
OS06G0226700 Oryza sativa OS06G0226700 I 0.832
Sb10g008030 Sorghum bicolor Sb10g008030 I 0.832
Si006631m.g Setaria italica Si006631m.g I 0.832
Pavir.J21462 Panicum virgatum Pavir.J21462 I 0.832
OMERI06G09680 Oryza meridionalis OMERI06G09680 I 0.832
ORUFI06G08380 Oryza rufipogon ORUFI06G08380 I 0.832
ORGLA06G0076500 Oryza glaberrima ORGLA06G0076500 I 0.832
OB06G17670 Oryza brachyantha OB06G17670 I 0.832
PK09668.1 Cannabis sativa PK09668.1 I 0.831
SapurV1A.0012s0470 Salix purpurea SapurV1A.0012s0470 I 0.831
estExt_fgenesh1_pg.C_670100 Physcomitrella patens estExt_fgenesh1_pg.C_670100 I 0.831
POPTR_0004s04600 Populus trichocarpa POPTR_0004s04600 I 0.831
evm.TU.supercontig_128.6 Carica papaya evm.TU.supercontig_128.6 I 0.831
Thhalv10018667m.g Eutrema salsugineum Thhalv10018667m.g I 0.831
TCP15 Arabidopsis thaliana AT1G69690 D 0.830
Lus10037190.g Linum usitatissimum Lus10037190.g I 0.830
Gorai.N023400 Gossypium raimondii Gorai.N023400 I 0.830
Gorai.008G181600 Gossypium raimondii Gorai.008G181600 I 0.830
orange1.1g016130m.g Citrus sinensis orange1.1g016130m.g I 0.830
Ciclev10031757m.g Citrus clementina Ciclev10031757m.g I 0.830
PRUPE_ppa022140mg Prunus persica PRUPE_ppa022140mg I 0.830
Cagra.13056s0010 Capsella grandiflora Cagra.13056s0010 I 0.830
Bostr.10273s0396 Boechera stricta Bostr.10273s0396 I 0.830
Gorai.013G084500 Gossypium raimondii Gorai.013G084500 I 0.830
Carubv10020637m.g Capsella rubella Carubv10020637m.g I 0.830
MTR_4g108370 Medicago truncatula MTR_4g108370 I 0.830
fgenesh2_kg.2__1231__AT1G69690.1 Arabidopsis lyrata fgenesh2_kg.2__1231__AT1G69690.1 I 0.830
Pavir.J03131 Panicum virgatum Pavir.J03131 I 0.829
PGSC0003DMG400003382 Solanum tuberosum PGSC0003DMG400003382 I 0.829
OS01G0924400 Oryza sativa OS01G0924400 I 0.829
ORUFI01G45710 Oryza rufipogon ORUFI01G45710 I 0.829
AMTR_s00017p00035550 Amborella trichopoda AMTR_s00017p00035550 I 0.829
GRMZM2G092214 Zea mays GRMZM2G092214 I 0.829
GRMZM2G034638 Zea mays GRMZM2G034638 I 0.829
Cla010342 Citrullus lanatus Cla010342 I 0.828
OGLUM06G08590 Oryza glumaepatula OGLUM06G08590 I 0.827
MDP0000515080 Malus domestica MDP0000515080 I 0.827
MDP0000608645 Malus domestica MDP0000608645 I 0.827
Solyc05g007420.1 Solanum lycopersicum Solyc05g007420.1 I 0.827
Solyc01g103780.2 Solanum lycopersicum Solyc01g103780.2 I 0.827
MDP0000319266 Malus domestica MDP0000319266 I 0.827
Cucsa.076020 Cucumis sativus Cucsa.076020 I 0.827
fgenesh1_pg.scaffold_348000004 Physcomitrella patens fgenesh1_pg.scaffold_348000004 I 0.827
Cucsa.285170 Cucumis sativus Cucsa.285170 I 0.826
OPUNC01G41170 Oryza punctata OPUNC01G41170 I 0.826
SapurV1A.0277s0170 Salix purpurea SapurV1A.0277s0170 I 0.826
MDP0000374900 Malus domestica MDP0000374900 I 0.825
LjT43G14.10.nd Lotus japonicus LjT43G14.10.nd I 0.825
BRADI3G59320 Brachypodium distachyon BRADI3G59320 I 0.825
Eucgr.F02587 Eucalyptus grandis Eucgr.F02587 I 0.825
OS04G0542302 Oryza sativa OS04G0542302 I 0.824
Bra008001 Brassica rapa Bra008001 I 0.824
Aquca_011_00080 Aquilegia coerulea Aquca_011_00080 I 0.824
Gorai.009G289000 Gossypium raimondii Gorai.009G289000 I 0.824
Bo2g075210 Brassica oleracea Bo2g075210 I 0.824
Bo3g004850 Brassica oleracea Bo3g004850 I 0.823
Bra005984 Brassica rapa Bra005984 I 0.823
TRIUR3_29014 Triticum urartu TRIUR3_29014 I 0.822
Aquca_006_00276 Aquilegia coerulea Aquca_006_00276 I 0.822
GRMZM2G142751 Zea mays GRMZM2G142751 I 0.822
GRMZM2G113888 Zea mays GRMZM2G113888 I 0.822
Bo6g114530 Brassica oleracea Bo6g114530 I 0.822