Pm029002 (Prunus mume)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pm029002 T344567_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.914 0.448
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH

DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.864 0.396
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC

GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.863 0.435
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm029002 TCP 166 319

Links

Other TCP family TFs
Other Prunus mume TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.983
MDP0000173048 Malus domestica MDP0000173048 I 0.953
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.935
MDP0000272980 Malus domestica MDP0000272980 I 0.933
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.932
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.929
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.927
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.926
29738.m001041 Ricinus communis 29738.m001041 I 0.926
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.924
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.924
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.924
Cla002355 Citrullus lanatus Cla002355 I 0.922
BRC2 Arabidopsis thaliana AT1G68800 I 0.921
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.919
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.919
TCM_011874 Theobroma cacao TCM_011874 I 0.918
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.918
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.917
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.916
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.915
PK12240.1 Cannabis sativa PK12240.1 D 0.914
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.907
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.907
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.906
Bra038350 Brassica rapa Bra038350 I 0.904
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.904
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.904
Bo2g061250 Brassica oleracea Bo2g061250 I 0.904
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.904
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.896
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.896
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.895
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.895
Cla016709 Citrullus lanatus Cla016709 I 0.894
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.893
Cla007227 Citrullus lanatus Cla007227 I 0.893
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.890
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.888
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.881
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.881
30167.m000856 Ricinus communis 30167.m000856 I 0.881
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.880
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.880
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.879
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.874
TCM_019518 Theobroma cacao TCM_019518 I 0.874
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.872
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.872
mgf019480m Mimulus guttatus mgf019480m I 0.872
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.872
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.870
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.870
mgf026636m Mimulus guttatus mgf026636m I 0.869
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.867
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.867
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.866
Bra004212 Brassica rapa Bra004212 I 0.866
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.866
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.866
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.865
Pm015499 Prunus mume Pm015499 I 0.865
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.864
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.864
TCP1 Arabidopsis thaliana AT1G67260 D 0.864
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.863
PK19717.1 Cannabis sativa PK19717.1 D 0.863
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.863
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.861
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.861
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.860
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.859
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.859
Bo6g103670 Brassica oleracea Bo6g103670 I 0.858
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.857
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.857
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.856
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.855
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.855
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.855
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.852
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.852
Bo6g099040 Brassica oleracea Bo6g099040 I 0.850
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.848
Bra004097 Brassica rapa Bra004097 I 0.848
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.848
30174.m008721 Ricinus communis 30174.m008721 I 0.846
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.843
Bo2g055640 Brassica oleracea Bo2g055640 I 0.838
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.838
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.837
MDP0000224810 Malus domestica MDP0000224810 N 0.834
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.833
mgf022233m Mimulus guttatus mgf022233m I 0.833
Solyc03g045030.1 Solanum lycopersicum Solyc03g045030.1 I 0.832
mgf024687m Mimulus guttatus mgf024687m I 0.831
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.831
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.826
Bra034010 Brassica rapa Bra034010 I 0.826
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.825
Pm030202 Prunus mume Pm030202 I 0.823
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.823