30014.m000446 (Ricinus communis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 30014.m000446 T344581_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.973 0.817
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.971 0.687
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.971 0.687
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.959 0.548
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.955 0.565
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.955 0.557
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.954 0.583
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.954 0.583
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.953 0.539
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.949 0.557
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.947 0.522
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.944 0.504
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.944 0.504
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.944 0.504
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.944 0.504
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.944 0.504
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.939 0.470
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.939 0.496
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.939 0.496
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.938 0.461
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.936 0.496
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.936 0.496
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.936 0.496
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.936 0.522
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.935 0.539
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.935 0.478
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.933 0.513
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.930 0.470
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.930 0.470
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.930 0.470
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.930 0.470
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.930 0.470
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.930 0.470
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.864 0.409
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.864 0.409
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30014.m000446 TCP 34 202

Links

Other TCP family TFs
Other Ricinus communis TFs

643 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NCU02576 Neurospora crassa NCU02576 D 0.000
Bcin05g07400 Botrytis cinerea Bcin05g07400 D 0.000
estExt_fgenesh1_pg.C_40812 Cryphonectria parasitica estExt_fgenesh1_pg.C_40812 I 0.000
PV09_04867 Verruconis gallopava PV09_04867 I 0.000
S40285_06932 Stachybotrys chlorohalonata S40285_06932 I 0.000
S40288_06487 Stachybotrys chartarum S40288_06487 I 0.000
SAPIO_CDS5525 Scedosporium apiospermum SAPIO_CDS5525 I 0.000
SBOR_8563 Sclerotinia borealis SBOR_8563 I 0.000
SETTUDRAFT_160027 Setosphaeria turcica SETTUDRAFT_160027 I 0.000
PTT_01647 Pyrenophora teres PTT_01647 I 0.000
PODANS_1_8960 Podospora anserina PODANS_1_8960 I 0.000
PFICI_13658 Pestalotiopsis fici PFICI_13658 I 0.000
OIDMADRAFT_43859 Oidiodendron maius OIDMADRAFT_43859 I 0.000
NEUTE1DRAFT_73358 Neurospora tetrasperma NEUTE1DRAFT_73358 I 0.000
NechaG31542 Fusarium solani NechaG31542 I 0.000
MYCTH_2295212 Myceliophthora thermophila MYCTH_2295212 I 0.000
MPH_00528 Macrophomina phaseolina MPH_00528 I 0.000
SMAC_05786 Sordaria macrospora SMAC_05786 I 0.000
SS1G_12158 Sclerotinia sclerotiorum SS1G_12158 I 0.000
estExt_fgenesh2_pg.C_20614 Neurospora discreta estExt_fgenesh2_pg.C_20614 I 0.000
e_gw1.3.38.1 Cochliobolus heterostrophus C5 e_gw1.3.38.1 I 0.000
e_gw1.1.1349.1 Nectria haematococca e_gw1.1.1349.1 I 0.000
X797_008205 Metarhizium robertsii X797_008205 I 0.000
W97_03429 Coniosporium apollinis W97_03429 I 0.000
VHEMI03709 Torrubiella hemipterigena VHEMI03709 I 0.000
VDBG_03734 Verticillium alfalfae VDBG_03734 I 0.000
V499_02224 Pseudogymnoascus pannorum V499_02224 I 0.000
UV8b_6694 Ustilaginoidea virens UV8b_6694 I 0.000
UCRNP2_4523 Neofusicoccum parvum UCRNP2_4523 I 0.000
TRIVIDRAFT_85198 Trichoderma virens TRIVIDRAFT_85198 I 0.000
TRIREDRAFT_108940 Trichoderma reesei TRIREDRAFT_108940 I 0.000
TRIATDRAFT_323311 Trichoderma atroviride TRIATDRAFT_323311 I 0.000
THITE_2122040 Thielavia terrestris THITE_2122040 I 0.000
MGU_07934 Metarhizium guizhouense MGU_07934 I 0.000
MGG_17060 Magnaporthe oryzae MGG_17060 I 0.000
MBR_08632 Metarhizium brunneum MBR_08632 I 0.000
CTHT_0054920 Chaetomium thermophilum CTHT_0054920 I 0.000
CSUB01_12250 Colletotrichum sublineola CSUB01_12250 I 0.000
COCVIDRAFT_94490 Bipolaris victoriae COCVIDRAFT_94490 I 0.000
COCMIDRAFT_104594 Bipolaris oryzae COCMIDRAFT_104594 I 0.000
COCCADRAFT_85714 Bipolaris zeicola COCCADRAFT_85714 I 0.000
COCC4DRAFT_131281 Bipolaris maydis COCC4DRAFT_131281 I 0.000
Cob_13345 Colletotrichum orbiculare Cob_13345 I 0.000
CH063_10117 Colletotrichum higginsianum CH063_10117 I 0.000
CGGC5_11802 Colletotrichum gloeosporioides CGGC5_11802 I 0.000
CFIO01_10853 Colletotrichum fioriniae CFIO01_10853 I 0.000
CCM_07661 Cordyceps militaris CCM_07661 I 0.000
BBA_05317 Beauveria bassiana BBA_05317 I 0.000
AOL_s00078g183 Arthrobotrys oligospora AOL_s00078g183 I 0.000
ACRE_047960 Acremonium chrysogenum ACRE_047960 I 0.000
DRE_06035 Drechslerella stenobrocha DRE_06035 I 0.000
F503_05162 Ophiostoma piceae uamh F503_05162 I 0.000
FFUJ_04086 Fusarium fujikuroi FFUJ_04086 I 0.000
MBM_03422 Marssonina brunnea MBM_03422 I 0.000
MAPG_07711 Magnaporthe poae MAPG_07711 I 0.000
MANI_121568 Metarhizium anisopliae MANI_121568 I 0.000
MAM_07569 Metarhizium album MAM_07569 I 0.000
MAJ_09934 Metarhizium majus MAJ_09934 I 0.000
MAC_06599 Metarhizium acridum MAC_06599 I 0.000
H072_5123 Dactylellina haptotyla H072_5123 I 0.000
GMDG_00720 Pseudogymnoascus destructans GMDG_00720 I 0.000
GLRG_00660 Colletotrichum graminicola GLRG_00660 I 0.000
GGTG_00966 Gaeumannomyces graminis GGTG_00966 I 0.000
FVEG_03789 Fusarium verticillioides FVEG_03789 I 0.000
FPSE_09716 Fusarium pseudograminearum FPSE_09716 I 0.000
FOXG_05918 Fusarium oxysporum FOXG_05918 I 0.000
FGRRES_17192 Fusarium graminearum FGRRES_17192 I 0.000
VDBG_03734 Verticillium albo atrum VDBG_03734 I 0.000