30167.m000856 (Ricinus communis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 30167.m000856 T344589_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.928 0.428
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC

GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.900 0.483
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH

DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.887 0.448
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30167.m000856 TCP 92 236

Links

Other TCP family TFs
Other Ricinus communis TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_01923 Aegilops tauschii F775_01923 I 0.860
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.922
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.844
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.932
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.932
BRC2 Arabidopsis thaliana AT1G68800 I 0.934
TCP1 Arabidopsis thaliana AT1G67260 D 0.887
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.923
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.904
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.834
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.824
Bo6g103670 Brassica oleracea Bo6g103670 I 0.914
Bo6g099040 Brassica oleracea Bo6g099040 I 0.884
Bo2g061250 Brassica oleracea Bo2g061250 I 0.885
Bo2g055640 Brassica oleracea Bo2g055640 I 0.854
Bra004097 Brassica rapa Bra004097 I 0.915
Bra038350 Brassica rapa Bra038350 I 0.885
Bra034010 Brassica rapa Bra034010 I 0.858
Bra004212 Brassica rapa Bra004212 I 0.902
PK12240.1 Cannabis sativa PK12240.1 D 0.928
PK19717.1 Cannabis sativa PK19717.1 D 0.900
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.906
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.923
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.894
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.923
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.923
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.889
Cla002355 Citrullus lanatus Cla002355 I 0.891
Cla016709 Citrullus lanatus Cla016709 I 0.901
Cla007227 Citrullus lanatus Cla007227 I 0.896
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.882
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.888
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.888
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.882
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.905
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.921
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.899
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.825
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.928
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.875
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.925
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.873
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.910
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.903
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.899
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.852
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.903
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.889
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.854
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.903
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.866
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.849
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.867
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.889
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.861
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.851
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.850
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.858
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.829
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.887
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.844
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.867
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.910
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.909
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.913
MDP0000224810 Malus domestica MDP0000224810 N 0.829
MDP0000272980 Malus domestica MDP0000272980 I 0.926
MDP0000173048 Malus domestica MDP0000173048 I 0.900
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.847
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.872
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.941
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.849
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.915
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.907
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.887
mgf019480m Mimulus guttatus mgf019480m I 0.883
mgf022233m Mimulus guttatus mgf022233m I 0.860
mgf024687m Mimulus guttatus mgf024687m I 0.888
mgf026636m Mimulus guttatus mgf026636m I 0.876
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.859
OBART09G10040 Oryza barthii OBART09G10040 I 0.825
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.824
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.825
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.826
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.826
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.825
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.855
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.825
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.833
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.825
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.831
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.835
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.828
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.826
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.825
OS08G0432300 Oryza sativa OS08G0432300 I 0.826
OS09G0410500 Oryza sativa OS09G0410500 I 0.825
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.840
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.846
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.873
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.878
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.847
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.925
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.848
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.885
Pm029002 Prunus mume Pm029002 I 0.881
Pm015499 Prunus mume Pm015499 I 0.908
Pm030202 Prunus mume Pm030202 I 0.885
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.885
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.881
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.908
29738.m001041 Ricinus communis 29738.m001041 I 0.880
30174.m008721 Ricinus communis 30174.m008721 I 0.841
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.847
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.834
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.889
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.830
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.830
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.926
Si033183m.g Setaria italica Si033183m.g I 0.850
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.830
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.903
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.890
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.876
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.883
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.826
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.848
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.872
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.902
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.831
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.840
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.846
TCM_012252 Theobroma cacao TCM_012252 I 0.853
TCM_019518 Theobroma cacao TCM_019518 I 0.899
TCM_011874 Theobroma cacao TCM_011874 I 0.873
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.851
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.849
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.851
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.851
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.844
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.851
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.885
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.862
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.846
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.861
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.826
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.853
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.832
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.878