mgf014960m (Mimulus guttatus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 mgf014960m T344667_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.897 0.228
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.897 0.228
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.897 0.228
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.897 0.228
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf014960m TCP 37 172
mgf014960m TCP 179 275

Links

Other TCP family TFs
Other Mimulus guttatus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr3.CM0282.560.nc Lotus japonicus chr3.CM0282.560.nc I 0.934
ONIVA07G01330 Oryza nivara ONIVA07G01330 I 0.917
OS07G0152000 Oryza sativa OS07G0152000 I 0.917
ORGLA07G0028600 Oryza glaberrima ORGLA07G0028600 I 0.917
OGLUM07G02670 Oryza glumaepatula OGLUM07G02670 I 0.917
BGIOSGA025162 Oryza indica BGIOSGA025162 I 0.917
ORUFI07G03030 Oryza rufipogon ORUFI07G03030 I 0.913
Bra032365 Brassica rapa Bra032365 I 0.911
OBART07G03380 Oryza barthii OBART07G03380 I 0.909
Bo5g062580 Brassica oleracea Bo5g062580 I 0.900
Lus10038512.g Linum usitatissimum Lus10038512.g I 0.898
TCP24 Arabidopsis thaliana AT1G30210 D 0.897
TCP24 Arabidopsis lyrata fgenesh2_kg.1__3195__AT1G30210.2 D 0.897
Bostr.15697s0315 Boechera stricta Bostr.15697s0315 I 0.897
MTR_7g015010 Medicago truncatula MTR_7g015010 I 0.893
Thhalv10008175m.g Eutrema salsugineum Thhalv10008175m.g I 0.890
Lus10017856.g Linum usitatissimum Lus10017856.g I 0.890
BRC1 Vitis vinifera VIT_17s0000g04180 I 0.864
ORUFI02G34160 Oryza rufipogon ORUFI02G34160 I 0.863
Cla020670 Citrullus lanatus Cla020670 I 0.854
mgf025386m Mimulus guttatus mgf025386m I 0.853
gene10333-v1.0-hybrid Fragaria vesca gene10333-v1.0-hybrid I 0.845
Solyc02g089830.1 Solanum lycopersicum Solyc02g089830.1 I 0.841
PGSC0003DMG400010045 Solanum tuberosum PGSC0003DMG400010045 I 0.839
OGLUM02G33090 Oryza glumaepatula OGLUM02G33090 I 0.835
Thhalv10018773m.g Eutrema salsugineum Thhalv10018773m.g I 0.832
Ciclev10007109m.g Citrus clementina Ciclev10007109m.g I 0.825
orange1.1g047495m.g Citrus sinensis orange1.1g047495m.g I 0.825
Ciclev10012612m.g Citrus clementina Ciclev10012612m.g I 0.825
Lus10042962.g Linum usitatissimum Lus10042962.g I 0.824