Bostr.19424s0807 (Boechera stricta)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Bostr.19424s0807 T344711_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.836 0.406
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.19424s0807.1.p TCP 145 307

Links

Other TCP family TFs
Other Boechera stricta TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30174.m008721 Ricinus communis 30174.m008721 I 0.868
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.826
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.836
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.844
Bo1g117490 Brassica oleracea Bo1g117490 I 0.949
Bo3g071560 Brassica oleracea Bo3g071560 I 0.957
Bo5g117410 Brassica oleracea Bo5g117410 N 0.959
Bra001710 Brassica rapa Bra001710 I 0.969
Bra037579 Brassica rapa Bra037579 I 0.949
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.834
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.829
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.826
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.970
BRC1 Arabidopsis thaliana AT3G18550 I 0.974
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.969
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.969
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.851
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.843
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.871
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.848
Cla018797 Citrullus lanatus Cla018797 N 0.854
Cla019282 Citrullus lanatus Cla019282 N 0.875
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.875
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.876
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.851
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.832
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.887
F775_01923 Aegilops tauschii F775_01923 I 0.860
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.876
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.864
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.864
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.889
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.890
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.880
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.848
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.841
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.862
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.824
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.835
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.842
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.848
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.849
MDP0000219838 Malus domestica MDP0000219838 N 0.848
MDP0000224810 Malus domestica MDP0000224810 N 0.864
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.823
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.863
OBART03G31290 Oryza barthii OBART03G31290 I 0.832
OBART09G10040 Oryza barthii OBART09G10040 I 0.844
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.836
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.844
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.832
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.828
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.831
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.836
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.844
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.828
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.828
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.840
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.848
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.832
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.836
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.844
OS09G0410500 Oryza sativa OS09G0410500 I 0.844
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.836
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.846
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.839
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.844
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.823
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.839
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.860
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.860
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.847
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.859
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.859
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.839
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.853
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.835
Si015230m.g Setaria italica Si015230m.g I 0.858
Si033183m.g Setaria italica Si033183m.g I 0.828
Si038692m.g Setaria italica Si038692m.g I 0.837
TB1 Oryza sativa OS03G0706500 D 0.836
TCM_012252 Theobroma cacao TCM_012252 I 0.873
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.965
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.829