evm.TU.supercontig_1401.1 (Carica papaya)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 evm.TU.supercontig_1401.1 T344812_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.910 0.468
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH

DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.872 0.392
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC

GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.865 0.424
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_1401.1 TCP 129 294

Links

Other TCP family TFs
Other Carica papaya TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AB00149.1 Alternaria brassicicola AB00149.1 I 0.000
BBA_03262 Beauveria bassiana BBA_03262 I 0.000
BDDG_01946 Blastomyces dermatitidis BDDG_01946 I 0.000
ACLA_091820 Aspergillus clavatus CADACLAG00008439 I 0.000
AFUA_2G03020 Aspergillus fumigatus CADAFUAG00003420 I 0.000
ANIA_04524 Aspergillus nidulans CADANIAG00005916 D 0.000
CADAORAG00008664 Aspergillus oryzae CADAORAG00008664 I 0.000
NFIA_035370 Neosartorya fischeri CADNFIAG00003845 I 0.000
CCM_01606 Cordyceps militaris CCM_01606 I 0.000
CFIO01_13556 Colletotrichum fioriniae CFIO01_13556 I 0.000
CGGC5_5234 Colletotrichum gloeosporioides CGGC5_5234 I 0.000
CH063_08705 Colletotrichum higginsianum CH063_08705 I 0.000
CHGG_05536 Chaetomium globosum CHGG_05536 I 0.000
CIMG_04575 Coccidioides immitis CIMG_04575 I 0.000
Cob_12050 Colletotrichum orbiculare Cob_12050 I 0.000
COCC4DRAFT_156032 Bipolaris maydis COCC4DRAFT_156032 I 0.000
COCCADRAFT_36163 Bipolaris zeicola COCCADRAFT_36163 I 0.000
COCMIDRAFT_32036 Bipolaris oryzae COCMIDRAFT_32036 I 0.000
COCSADRAFT_213056 Bipolaris sorokiniana COCSADRAFT_213056 I 0.000
COCVIDRAFT_83639 Bipolaris victoriae COCVIDRAFT_83639 I 0.000
CPC735_072160 Coccidioides posadasii CPC735_072160 I 0.000
CTHT_0071270 Chaetomium thermophilum CTHT_0071270 I 0.000
DOTSEDRAFT_116530 Dothistroma septosporum DOTSEDRAFT_116530 I 0.000
estExt_fgenesh2_pg.C_200015 Neurospora discreta estExt_fgenesh2_pg.C_200015 I 0.000
estExt_Genewise1Plus.C_21297 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_21297 I 0.000
e_gw1.00009.336.1 Aspergillus carbonarius e_gw1.00009.336.1 I 0.000
FFUJ_07927 Fusarium fujikuroi FFUJ_07927 I 0.000
fgenesh1_pg.sca_20_chr6_4_0000490 Nectria haematococca fgenesh1_pg.sca_20_chr6_4_0000490 I 0.000
FGRRES_02538 Fusarium graminearum FGRRES_02538 I 0.000
FOXG_10566 Fusarium oxysporum FOXG_10566 I 0.000
FPSE_08658 Fusarium pseudograminearum FPSE_08658 I 0.000
FVEG_09213 Fusarium verticillioides FVEG_09213 I 0.000
GSTUM_00007236001 Tuber melanosporum GSTUM_00007236001 I 0.000
gw1.1.3793.1 Mycosphaerella graminicola gw1.1.3793.1 I 0.000
gw1.13.456.1 Mycosphaerella fijiensis gw1.13.456.1 I 0.000
H072_4198 Dactylellina haptotyla H072_4198 I 0.000
H101_05733 Trichophyton interdigitale H101_05733 I 0.000
HCBG_00496 Histoplasma capsulatum HCBG_00496 I 0.000
LEMA_P069020.1 Leptosphaeria maculans LEMA_P069020.1 I 0.000
MCYG_05889 Microsporum canis MCYG_05889 I 0.000
MCYG_05889 Arthroderma otae MCYG_05889 I 0.000
MGYG_06082 Microsporum gypseum MGYG_06082 I 0.000
MPH_09871 Macrophomina phaseolina MPH_09871 I 0.000
MYCFIDRAFT_112048 Pseudocercospora fijiensis MYCFIDRAFT_112048 I 0.000
Mycgr3G28684 Zymoseptoria tritici Mycgr3G28684 I 0.000
MYCTH_50303 Myceliophthora thermophila MYCTH_50303 I 0.000
NCU07834 Neurospora crassa NCU07834 D 0.000
NechaG81864 Fusarium solani NechaG81864 I 0.000
NEUTE1DRAFT_80911 Neurospora tetrasperma NEUTE1DRAFT_80911 I 0.000
PAAG_06795 Paracoccidioides sp lutzii PAAG_06795 I 0.000
PABG_01081 Paracoccidioides brasiliensis PABG_01081 I 0.000
PFICI_05808 Pestalotiopsis fici PFICI_05808 I 0.000
PMAA_055660 Penicillium marneffei PMAA_055660 I 0.000
PMAA_055660 Talaromyces marneffei PMAA_055660 I 0.000
PTT_08996 Pyrenophora teres PTT_08996 I 0.000
PV09_00458 Verruconis gallopava PV09_00458 I 0.000
PVAR5_1965 Byssochlamys spectabilis PVAR5_1965 I 0.000
S40285_00496 Stachybotrys chlorohalonata S40285_00496 I 0.000
SAPIO_CDS7771 Scedosporium apiospermum SAPIO_CDS7771 I 0.000
SEPMUDRAFT_140497 Sphaerulina musiva SEPMUDRAFT_140497 I 0.000
SETTUDRAFT_41277 Setosphaeria turcica SETTUDRAFT_41277 I 0.000
SMAC_02112 Sordaria macrospora SMAC_02112 I 0.000
SNOG_09800 Stagonospora nodorum SNOG_09800 I 0.000
SNOG_09800 Phaeosphaeria nodorum SNOG_09800 I 0.000
TEQG_06366 Trichophyton equinum TEQG_06366 I 0.000
TSTA_016710 Talaromyces stipitatus TSTA_016710 I 0.000
UCRNP2_4750 Neofusicoccum parvum UCRNP2_4750 I 0.000
UV8b_3847 Ustilaginoidea virens UV8b_3847 I 0.000
W97_06488 Coniosporium apollinis W97_06488 I 0.000