MDP0000219838 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000219838 T344923_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000219838 TCP 266 425

Links

Other TCP family TFs
Other Malus domestica TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRC1 Arabidopsis thaliana AT3G18550 I 0.833
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.848
Bo1g117490 Brassica oleracea Bo1g117490 I 0.836
Bo3g071560 Brassica oleracea Bo3g071560 I 0.829
Bo5g117410 Brassica oleracea Bo5g117410 N 0.822
Bra001710 Brassica rapa Bra001710 I 0.834
Bra037579 Brassica rapa Bra037579 I 0.836
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.835
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.835
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.872
Cla018797 Citrullus lanatus Cla018797 N 0.875
Cla019282 Citrullus lanatus Cla019282 N 0.901
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.877
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.827
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.877
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.827
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.869
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.898
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.887
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.822
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.885
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.878
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.902
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.860
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.863
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.868
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.829
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.878
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.853
MDP0000224810 Malus domestica MDP0000224810 N 0.966
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.863
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.896
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.835
mgf024687m Mimulus guttatus mgf024687m I 0.846
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.830
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.873
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.875
Pm030202 Prunus mume Pm030202 I 0.927
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.927
30174.m008721 Ricinus communis 30174.m008721 I 0.859
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.843
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.861
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.861
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.874
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.863
Si033183m.g Setaria italica Si033183m.g I 0.826
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.850
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.875
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.855
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.874
TCM_012252 Theobroma cacao TCM_012252 I 0.873
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.825