Pavir.Ia00838 (Panicum virgatum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pavir.Ia00838 T345007_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.949 0.695
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia00838.1.p TCP 114 268

Links

Other TCP family TFs
Other Panicum virgatum TFs

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82 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action