CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0583s0060
(
Salix purpurea
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
SapurV1A.0583s0060
T345055_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC
GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.850
0.409
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.822
0.364
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0583s0060.1.p
TCP
126
279
SSKRDRHSKINTAQGPRDRRMRLSLKVAREFFDLQDKLSFDKASKTVEWLLVQAKSEIKKLSSGSPHMSYSGSAGTKNASSTSECEMLSEMNAETTTKGRNVSNKGRSSPCAKKERRARRPTSRKTPLNPFAKESREKARARARERTKEKLCSR
Links
Other
TCP
family TFs
Other
Salix purpurea
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA034366
Oryza indica
BGIOSGA034366
N
0.000
ORUFI11G05240
Oryza rufipogon
ORUFI11G05240
N
0.000
ORGLA11G0198500
Oryza glaberrima
ORGLA11G0198500
N
0.000
ORGLA03G0022100
Oryza glaberrima
ORGLA03G0022100
N
0.000
OPUNC11G05200
Oryza punctata
OPUNC11G05200
N
0.000
ONIVA11G05790
Oryza nivara
ONIVA11G05790
N
0.000
OMERI11G04470
Oryza meridionalis
OMERI11G04470
N
0.000
OMERI03G02300
Oryza meridionalis
OMERI03G02300
N
0.000
OGLUM03G02370
Oryza glumaepatula
OGLUM03G02370
N
0.000
OBART11G05410
Oryza barthii
OBART11G05410
N
0.000
OBART03G02440
Oryza barthii
OBART03G02440
N
0.000
LPERR11G04840
Leersia perrieri
LPERR11G04840
N
0.000
LPERR03G02230
Leersia perrieri
LPERR03G02230
N
0.000
BGIOSGA034369
Oryza indica
BGIOSGA034369
N
0.000
OS11G0187200
Oryza sativa
OS11G0187200
N
0.000