SapurV1A.0682s0140 (Salix purpurea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 SapurV1A.0682s0140 T345056_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.944 0.504
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC

GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.886 0.534
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH

DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.877 0.459
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.835 0.504
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0682s0140.1.p TCP 13 145

Links

Other TCP family TFs
Other Salix purpurea TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCP1 Arabidopsis thaliana AT1G67260 D 0.877
PK12240.1 Cannabis sativa PK12240.1 D 0.944
TB1 Oryza sativa OS03G0706500 D 0.835
PK19717.1 Cannabis sativa PK19717.1 D 0.886
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.886
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.913
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.845
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.834
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.900
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.938
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.944
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.932
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.893
mgf019480m Mimulus guttatus mgf019480m I 0.917
mgf022233m Mimulus guttatus mgf022233m I 0.883
mgf024687m Mimulus guttatus mgf024687m I 0.867
mgf026636m Mimulus guttatus mgf026636m I 0.831
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.923
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.847
30174.m008721 Ricinus communis 30174.m008721 I 0.837
30167.m000856 Ricinus communis 30167.m000856 I 0.926
Pm030202 Prunus mume Pm030202 I 0.861
TCM_011874 Theobroma cacao TCM_011874 I 0.877
TCM_012252 Theobroma cacao TCM_012252 I 0.852
TCM_019518 Theobroma cacao TCM_019518 I 0.902
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.875
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.875
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.875
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.856
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.875
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.870
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.861
Cla002355 Citrullus lanatus Cla002355 I 0.901
Cla007227 Citrullus lanatus Cla007227 I 0.897
Cla016709 Citrullus lanatus Cla016709 I 0.930
Pm015499 Prunus mume Pm015499 I 0.872
Pm029002 Prunus mume Pm029002 I 0.881
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.923
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.908
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.892
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.901
MDP0000173048 Malus domestica MDP0000173048 I 0.898
MDP0000272980 Malus domestica MDP0000272980 I 0.915
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.902
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.887
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.842
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.843
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.880
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.838
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.889
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.915
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.891
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.839
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.906
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.845
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.856
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.924
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.854
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.923
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.923
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.895
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.902
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.887
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.889
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.885
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.836
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.883
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.920
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.938
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.882
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.823
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.869
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.861
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.871
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.857
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.909
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.885
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.856
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.919
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.886
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.914
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.865
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.837
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.858
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.847
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.864
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.829
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.831
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.879
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.823
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.841
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.914
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.855
BRC2 Arabidopsis thaliana AT1G68800 I 0.933
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.835
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.833
Bo2g055640 Brassica oleracea Bo2g055640 I 0.878
Bo2g061250 Brassica oleracea Bo2g061250 I 0.856
Bo6g099040 Brassica oleracea Bo6g099040 I 0.884
Bo6g103670 Brassica oleracea Bo6g103670 I 0.902
Bra004097 Brassica rapa Bra004097 I 0.921
Bra004212 Brassica rapa Bra004212 I 0.900
Bra034010 Brassica rapa Bra034010 I 0.884
Bra038350 Brassica rapa Bra038350 I 0.856
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.836
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.849
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.917
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.933
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.855
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.878
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.917
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.827
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.909
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.873
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.880
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.846
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.838
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.967
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.861
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.881
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.869
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.874
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.849
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.829
Si015230m.g Setaria italica Si015230m.g I 0.823
Si033183m.g Setaria italica Si033183m.g I 0.843
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.850
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.852
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.904
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.896
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.922
OBART09G10040 Oryza barthii OBART09G10040 I 0.837
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.835
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.837
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.836
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.835
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.833
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.857
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.841
29738.m001041 Ricinus communis 29738.m001041 I 0.897
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.861
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.871
OS09G0410500 Oryza sativa OS09G0410500 I 0.837
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.833
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.835
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.823
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.843
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.843