SapurV1A.1895s0020 (Salix purpurea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 SapurV1A.1895s0020 T345066_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC

GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.830 0.383
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH

DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.827 0.383
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM

KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.822 0.435
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.1895s0020.1.p TCP 128 283

Links

Other TCP family TFs
Other Salix purpurea TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29738.m001041 Ricinus communis 29738.m001041 I 0.865
30167.m000856 Ricinus communis 30167.m000856 I 0.830
30174.m008721 Ricinus communis 30174.m008721 I 0.922
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.828
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.872
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.866
TCP1 Arabidopsis thaliana AT1G67260 D 0.827
BRC2 Arabidopsis thaliana AT1G68800 I 0.845
BRC1 Arabidopsis thaliana AT3G18550 I 0.834
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.822
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.875
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.846
Bo1g117490 Brassica oleracea Bo1g117490 I 0.829
Bo2g055640 Brassica oleracea Bo2g055640 I 0.822
Bo2g061250 Brassica oleracea Bo2g061250 I 0.847
Bo3g071560 Brassica oleracea Bo3g071560 I 0.826
Bo5g117410 Brassica oleracea Bo5g117410 N 0.840
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.859
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.837
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.842
Bra001710 Brassica rapa Bra001710 I 0.830
Bra034010 Brassica rapa Bra034010 I 0.828
Bra037579 Brassica rapa Bra037579 I 0.829
Bra038350 Brassica rapa Bra038350 I 0.847
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.834
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.859
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.838
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.837
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.853
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.853
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.837
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.848
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.860
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.853
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.941
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.944
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.863
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.884
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.892
Cla002355 Citrullus lanatus Cla002355 I 0.848
Cla016709 Citrullus lanatus Cla016709 I 0.831
Cla018797 Citrullus lanatus Cla018797 N 0.822
Cla019282 Citrullus lanatus Cla019282 N 0.879
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.847
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.868
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.857
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.827
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.898
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.834
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.866
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.877
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.864
F775_01923 Aegilops tauschii F775_01923 I 0.834
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.831
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.837
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.825
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.869
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.870
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.835
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.877
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.855
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.858
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.838
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.830
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.842
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.846
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.835
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.877
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.842
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.842
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.825
MDP0000173048 Malus domestica MDP0000173048 I 0.861
MDP0000219838 Malus domestica MDP0000219838 N 0.861
MDP0000224810 Malus domestica MDP0000224810 N 0.878
MDP0000272980 Malus domestica MDP0000272980 I 0.847
mgf024687m Mimulus guttatus mgf024687m I 0.839
mgf026636m Mimulus guttatus mgf026636m I 0.839
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.853
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.840
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.840
OBART08G15630 Oryza barthii OBART08G15630 N 0.857
OBART09G10040 Oryza barthii OBART09G10040 I 0.846
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.822
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.875
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.846
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.867
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.842
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.822
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.865
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.846
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.824
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.871
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.858
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.884
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.892
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.870
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.822
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.875
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.846
TB1 Oryza sativa OS03G0706500 D 0.822
OS08G0432300 Oryza sativa OS08G0432300 I 0.875
OS09G0410500 Oryza sativa OS09G0410500 I 0.846
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.842
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.848
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.828
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.831
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.836
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.850
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.852
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.851
PK19717.1 Cannabis sativa PK19717.1 D 0.830
Pm015499 Prunus mume Pm015499 I 0.858
Pm029002 Prunus mume Pm029002 I 0.855
Pm030202 Prunus mume Pm030202 I 0.867
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.868
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.875
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.954
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.969
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.867
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.855
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.858
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.976
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.883
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.954
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.983
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.824
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.846
Si015230m.g Setaria italica Si015230m.g I 0.826
Si033183m.g Setaria italica Si033183m.g I 0.844
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.847
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.852
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.827
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.850
TCM_011874 Theobroma cacao TCM_011874 I 0.874
TCM_012252 Theobroma cacao TCM_012252 I 0.872
TCM_019518 Theobroma cacao TCM_019518 I 0.829
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.842
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.834
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.861
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.868
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.857
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.856
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.844