PK19717.1 (Cannabis sativa)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 PK19717.1 T345112_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC

GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH

DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.896 0.437
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.878 0.404
For this family, TFs with SR scores > 0.822 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01318_2.00 TCP 52 202

DNA Binding Domains

Protein ID Domain From To Sequence
PK19717.1 TCP 154 304

Links

Other TCP family TFs
Other Cannabis sativa TFs

Invalid Input OrderBy

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action