LjSGA_018294.2 (Lotus japonicus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 LjSGA_018294.2 T345129_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS

SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.830 0.384
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_018294.2 TCP 1 138

Links

Other TCP family TFs
Other Lotus japonicus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.929
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.922
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.908
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.903
TCM_012252 Theobroma cacao TCM_012252 I 0.895
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.889
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.888
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.882
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.880
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.879
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.868
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.867
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.867
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.866
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.864
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.863
mgf024687m Mimulus guttatus mgf024687m I 0.862
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.860
Pm030202 Prunus mume Pm030202 I 0.860
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.854
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.854
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.854
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.853
MDP0000219838 Malus domestica MDP0000219838 N 0.853
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.847
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.845
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.845
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.844
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.842
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.840
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.840
BRC2 Arabidopsis thaliana AT1G68800 I 0.836
MDP0000224810 Malus domestica MDP0000224810 N 0.836
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.836
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.834
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.831
PK12240.1 Cannabis sativa PK12240.1 D 0.830
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.830
Cla018797 Citrullus lanatus Cla018797 N 0.830
Bra004097 Brassica rapa Bra004097 I 0.828
Bra034010 Brassica rapa Bra034010 I 0.827
BRC1 Arabidopsis thaliana AT3G18550 I 0.827
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.827
SELMODRAFT_7330 Selaginella moellendorffii SELMODRAFT_7330 I 0.826
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.826
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.826
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.825
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.823
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.823
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.823
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.823
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.823