CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LjSGA_135269.1
(
Lotus japonicus
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
LjSGA_135269.1
T345136_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_135269.1
TCP
1
126
RLGYDQPSKAVEWLIKSAADAIAELPSLPETPEQQSHERRGQGFDDSADAEVELEGTETSFHHQQNQNQNQNQSQNLSLSKSGCSSTSETSKGSGLSLSRSDIRVNRVKARERARERASKEKEKEK
Links
Other
TCP
family TFs
Other
Lotus japonicus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000420968
Malus domestica
MDP0000420968
N
0.914
OMERI08G12580
Oryza meridionalis
OMERI08G12580
N
0.910
TRIUR3_03984
Triticum urartu
TRIUR3_03984
N
0.899
MDP0000241536
Malus domestica
MDP0000241536
N
0.867
Si014095m.g
Setaria italica
Si014095m.g
N
0.862
TRIM56
Anolis carolinensis
ENSACAG00000007859
N
0.859
TRIUR3_02266
Triticum urartu
TRIUR3_02266
N
0.852
Pavir.J38641
Panicum virgatum
Pavir.J38641
N
0.843
Ca_24979
Cicer arietinum
Ca_24979
N
0.839
Traes_7AS_FCC142DBE
Triticum aestivum
Traes_7AS_FCC142DBE
N
0.838
TRIUR3_26293
Triticum urartu
TRIUR3_26293
N
0.838
fgenesh1_pg.C_scaffold_4001082
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_4001082
N
0.830
BGLB000529
Biomphalaria glabrata
BGLB000529
N
0.829
BLOC1S6
Sorex araneus
ENSSARG00000009861
N
0.829
BLOC1S6
Loxodonta africana
ENSLAFG00000000655
N
0.829
OB12G25740
Oryza brachyantha
OB12G25740
N
0.823