CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA16882
(
Drosophila pseudoobscura
)
TCR/CxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03638 (TCR)
IPR005172
FBgn0076896
T345358_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672
0.197
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH
DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672
0.189
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN
NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672
0.187
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW
WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672
0.187
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY
RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672
0.187
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN
NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672
0.187
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672
0.187
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672
0.187
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672
0.184
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH
DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672
0.184
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672
0.184
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672
0.184
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672
0.184
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672
0.184
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672
0.176
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH
DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672
0.173
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672
0.173
lin54
M02526_2.00
Danio rerio
NHTYRAAH
DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672
0.173
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH
DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672
0.173
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN
NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
0.672
0.173
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN
NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672
0.173
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672
0.173
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672
0.173
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672
0.173
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672
0.173
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672
0.171
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672
0.171
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672
0.155
For this family, TFs with SR scores >
0.660
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0280213
TCR/CxC
821
864
PICRCGTSGVAVNPKTTCRNTRCPCYKSGNTCTNCHCVGCHNPH
Links
Other
TCR/CxC
family TFs
Other
Drosophila pseudoobscura
TFs
1213 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYB_AVIMB
Avian myeloblastosis virus
MYB_AVIMB
D
0.000
Mybl1
Mus musculus
ENSMUSG00000025912
D
0.000
Myb
Mus musculus
ENSMUSG00000019982
D
0.000
MYB
Homo sapiens
ENSG00000118513
D
0.000
MYBL1
Homo sapiens
ENSG00000185697
D
0.000
ENSSHAG00000010559
Sarcophilus harrisii
ENSSHAG00000010559
I
0.000
MYBL1
Sorex araneus
ENSSARG00000006938
I
0.000
MYB
Sorex araneus
ENSSARG00000002855
I
0.000
ENSSHAG00000014728
Sarcophilus harrisii
ENSSHAG00000014728
I
0.000
MYB
Sus scrofa
ENSSSCG00000004167
I
0.000
ENSSTOG00000006634
Ictidomys tridecemlineatus
ENSSTOG00000006634
I
0.000
ENSSTOG00000007581
Ictidomys tridecemlineatus
ENSSTOG00000007581
I
0.000
MYB
Tupaia belangeri
ENSTBEG00000016454
I
0.000
MYBL1
Taeniopygia guttata
ENSTGUG00000011289
I
0.000
MYB
Taeniopygia guttata
ENSTGUG00000011495
I
0.000
mybl1
Tetraodon nigroviridis
ENSTNIG00000010104
I
0.000
myb
Tetraodon nigroviridis
ENSTNIG00000016319
I
0.000
mybl1
Takifugu rubripes
ENSTRUG00000008816
I
0.000
myb
Takifugu rubripes
ENSTRUG00000016069
I
0.000
Myb
Rattus norvegicus
ENSRNOG00000055858
I
0.000
Mybl1
Rattus norvegicus
ENSRNOG00000021669
I
0.000
MYB
Pteropus vampyrus
ENSPVAG00000007652
I
0.000
mybl1
Oryzias latipes
ENSORLG00000008488
I
0.000
myb
Oryzias latipes
ENSORLG00000016573
I
0.000
ENSPANG00000008051
Papio anubis
ENSPANG00000008051
I
0.000
ENSPANG00000018932
Papio anubis
ENSPANG00000018932
I
0.000
MYB
Procavia capensis
ENSPCAG00000009197
I
0.000
MYBL1
Procavia capensis
ENSPCAG00000009301
I
0.000
ENSPFOG00000005169
Poecilia formosa
ENSPFOG00000005169
I
0.000
ENSPFOG00000011241
Poecilia formosa
ENSPFOG00000011241
I
0.000
ENSPMAG00000000117
Petromyzon marinus
ENSPMAG00000000117
I
0.000
ENSPMAG00000001639
Petromyzon marinus
ENSPMAG00000001639
I
0.000
ENSPPYG00000017028
Pongo abelii
ENSPPYG00000017028
I
0.000
ENSPPYG00000018640
Pongo abelii
ENSPPYG00000018640
I
0.000
ENSPSIG00000011892
Pelodiscus sinensis
ENSPSIG00000011892
I
0.000
ENSPSIG00000011935
Pelodiscus sinensis
ENSPSIG00000011935
I
0.000
MYB
Pan troglodytes
ENSPTRG00000018631
I
0.000
MYBL1
Pan troglodytes
ENSPTRG00000020308
I
0.000
ENSTSYG00000014301
Tarsius syrichta
ENSTSYG00000014301
I
0.000
MYB
Tursiops truncatus
ENSTTRG00000003718
I
0.000
Myotis_brandtii_MYB_10035701
Myotis brandtii
Myotis_brandtii_MYB_10035701
I
0.000
Myotis_brandtii_MYBL1_10031628
Myotis brandtii
Myotis_brandtii_MYBL1_10031628
I
0.000
Ogr00471
Ophisaurus gracilis
Ogr00471
I
0.000
Ogr08782
Ophisaurus gracilis
Ogr08782
I
0.000
Pvit_15001
Pogona vitticeps
Pvit_15001
I
0.000
Pvit_17294
Pogona vitticeps
Pvit_17294
I
0.000
Tal_R003498
Tyto alba
Tal_R003498
I
0.000
Tal_R007653
Tyto alba
Tal_R007653
I
0.000
XP_002166953.1
Hydra magnipapillata
XP_002166953.1
I
0.000
estExt_fgenesh2_pg.C_1220082
Branchiostoma floridae
estExt_fgenesh2_pg.C_1220082
I
0.000
estExt_fgenesh2_pg.C_1220090
Branchiostoma floridae
estExt_fgenesh2_pg.C_1220090
I
0.000
Sakowv30034766m.g
Saccoglossus kowalevskii
Sakowv30034766m.g
I
0.000
myb
Xenopus tropicalis
XB-GENE-867553
I
0.000
myb.S
Xenopus laevis
XB-GENE-867566
I
0.000
mybl1
Xenopus tropicalis
XB-GENE-986560
I
0.000
mybl1.L
Xenopus laevis
XB-GENE-986561
I
0.000
Gfo_R006432
Geospiza fortis
Gfo_R006432
I
0.000
Gfo_R002003
Geospiza fortis
Gfo_R002003
I
0.000
MYBL1
Tursiops truncatus
ENSTTRG00000017138
I
0.000
MYBL1
Vicugna pacos
ENSVPAG00000004194
I
0.000
ENSXMAG00000001658
Xiphophorus maculatus
ENSXMAG00000001658
I
0.000
ENSXMAG00000004392
Xiphophorus maculatus
ENSXMAG00000004392
I
0.000
SMAR001262
Strigamia maritima
SMAR001262
I
0.000
Aan_R009776
Calypte anna
Aan_R009776
I
0.000
Afo_R010364
Aptenodytes forsteri
Afo_R010364
I
0.000
Afo_R014904
Aptenodytes forsteri
Afo_R014904
I
0.000
Alligator_sinensis_CCG001232.1
Alligator sinensis
Alligator_sinensis_CCG001232.1
I
0.000
Alligator_sinensis_CCG012608.1
Alligator sinensis
Alligator_sinensis_CCG012608.1
I
0.000
Brh_R005747
Buceros rhinoceros
Brh_R005747
I
0.000
Brh_R006445
Buceros rhinoceros
Brh_R006445
I
0.000
Cmyd_10011933
Chelonia mydas
Cmyd_10011933
I
0.000
ENSP00000339992-D1
Bos grunniens
ENSP00000339992-D1
I
0.000
ENSP00000339992
Macaca fascicularis
ENSP00000339992
I
0.000
ENSP00000385360
Macaca fascicularis
ENSP00000385360
I
0.000
XP_002935855
Xenopus tropicalis
XP_002935855
I
0.000
MYB
Anolis carolinensis
ENSACAG00000009861
I
0.000
ENSCSAG00000014195
Chlorocebus sabaeus
ENSCSAG00000014195
I
0.000
ENSCSAG00000016815
Chlorocebus sabaeus
ENSCSAG00000016815
I
0.000
mybl1
Danio rerio
ENSDARG00000030999
I
0.000
myb
Danio rerio
ENSDARG00000053666
I
0.000
MYBL1
Dasypus novemcinctus
ENSDNOG00000016860
I
0.000
MYB
Dasypus novemcinctus
ENSDNOG00000047370
I
0.000
MYB
Equus caballus
ENSECAG00000009918
I
0.000
MYBL1
Equus caballus
ENSECAG00000015959
I
0.000
MYB
Erinaceus europaeus
ENSEEUG00000001468
I
0.000
MYBL1
Echinops telfairi
ENSETEG00000009840
I
0.000
ENSFALG00000005444
Ficedula albicollis
ENSFALG00000005444
I
0.000
ENSFALG00000011914
Ficedula albicollis
ENSFALG00000011914
I
0.000
MYB
Felis catus
ENSFCAG00000001812
I
0.000
MYBL1
Felis catus
ENSFCAG00000031398
I
0.000
mybl1
Gasterosteus aculeatus
ENSGACG00000002964
I
0.000
MYB
Cavia porcellus
ENSCPOG00000014607
I
0.000
MYBL1
Cavia porcellus
ENSCPOG00000007578
I
0.000
MYB
Callithrix jacchus
ENSCJAG00000007798
I
0.000
MYBL1
Anolis carolinensis
ENSACAG00000016577
I
0.000
ENSAMEG00000009813
Ailuropoda melanoleuca
ENSAMEG00000009813
I
0.000
ENSAMEG00000012401
Ailuropoda melanoleuca
ENSAMEG00000012401
I
0.000
ENSAMXG00000004244
Astyanax mexicanus
ENSAMXG00000004244
I
0.000
ENSAMXG00000013759
Astyanax mexicanus
ENSAMXG00000013759
I
0.000
ENSAPLG00000007728
Anas platyrhynchos
ENSAPLG00000007728
I
0.000
ENSAPLG00000014596
Anas platyrhynchos
ENSAPLG00000014596
I
0.000
MYBL1
Bos taurus
ENSBTAG00000011981
I
0.000
MYB
Bos taurus
ENSBTAG00000012074
I
0.000
MYB
Canis familiaris
ENSCAFG00000000230
I
0.000
MYBL1
Canis familiaris
ENSCAFG00000007344
I
0.000
MYB
Choloepus hoffmanni
ENSCHOG00000010472
I
0.000
MYBL1
Choloepus hoffmanni
ENSCHOG00000012311
I
0.000
ENSCING00000018880
Ciona intestinalis
ENSCING00000018880
I
0.000
MYBL1
Callithrix jacchus
ENSCJAG00000004466
I
0.000
myb
Gasterosteus aculeatus
ENSGACG00000011054
I
0.000
MYB
Gallus gallus
ENSGALG00000013956
I
0.000
ENSGALG00000015522
Gallus gallus
ENSGALG00000015522
I
0.000
MYBL1
Monodelphis domestica
ENSMODG00000007964
I
0.000
MYB
Monodelphis domestica
ENSMODG00000017488
I
0.000
ENSMPUG00000014814
Mustela putorius furo
ENSMPUG00000014814
I
0.000
ENSNLEG00000014751
Nomascus leucogenys
ENSNLEG00000014751
I
0.000
MYBL1
Ornithorhynchus anatinus
ENSOANG00000002308
I
0.000
MYB
Ornithorhynchus anatinus
ENSOANG00000002777
I
0.000
ENSOARG00000014901
Ovis aries
ENSOARG00000014901
I
0.000
ENSOARG00000017663
Ovis aries
ENSOARG00000017663
I
0.000
MYB
Oryctolagus cuniculus
ENSOCUG00000011633
I
0.000
MYBL1
Oryctolagus cuniculus
ENSOCUG00000015184
I
0.000
MYB
Otolemur garnettii
ENSOGAG00000000056
I
0.000
MYBL1
Otolemur garnettii
ENSOGAG00000004344
I
0.000
ENSONIG00000000469
Oreochromis niloticus
ENSONIG00000000469
I
0.000
ENSONIG00000014188
Oreochromis niloticus
ENSONIG00000014188
I
0.000
MYBL1
Ochotona princeps
ENSOPRG00000005971
I
0.000
MYB
Macaca mulatta
ENSMMUG00000018166
I
0.000
MYBL1
Macaca mulatta
ENSMMUG00000013974
I
0.000
MYBL1
Myotis lucifugus
ENSMLUG00000003166
I
0.000
MYB
Gorilla gorilla
ENSGGOG00000001379
I
0.000
MYBL1
Gorilla gorilla
ENSGGOG00000003892
I
0.000
ENSGMOG00000011856
Gadus morhua
ENSGMOG00000011856
I
0.000
ENSGMOG00000017106
Gadus morhua
ENSGMOG00000017106
I
0.000
ENSLACG00000002813
Latimeria chalumnae
ENSLACG00000002813
I
0.000
ENSLACG00000011097
Latimeria chalumnae
ENSLACG00000011097
I
0.000
MYBL1
Loxodonta africana
ENSLAFG00000004821
I
0.000
MYB
Loxodonta africana
ENSLAFG00000018350
I
0.000
ENSLOCG00000004709
Lepisosteus oculatus
ENSLOCG00000004709
I
0.000
ENSLOCG00000016218
Lepisosteus oculatus
ENSLOCG00000016218
I
0.000
ENSMEUG00000010838
Macropus eugenii
ENSMEUG00000010838
I
0.000
MYB
Meleagris gallopavo
ENSMGAG00000013053
I
0.000
MYB
Microcebus murinus
ENSMICG00000005531
I
0.000
MYBL1
Microcebus murinus
ENSMICG00000009881
I
0.000
MYB
Myotis lucifugus
ENSMLUG00000002125
I
0.000
MYB
Ochotona princeps
ENSOPRG00000013639
I
0.000