GA16882 (Drosophila pseudoobscura)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 FBgn0076896 T345358_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.197
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.189
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.187
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.187
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.187
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.187
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.187
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.187
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.184
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.184
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.184
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.184
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.184
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.184
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.176
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.173
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.173
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.173
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.173
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.173
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.173
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.173
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.173
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.173
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.173
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.171
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.171
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.155
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0280213 TCR/CxC 821 864

Links

Other TCR/CxC family TFs
Other Drosophila pseudoobscura TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB_AVIMB Avian myeloblastosis virus MYB_AVIMB D 0.000
Mybl1 Mus musculus ENSMUSG00000025912 D 0.000
Myb Mus musculus ENSMUSG00000019982 D 0.000
MYB Homo sapiens ENSG00000118513 D 0.000
MYBL1 Homo sapiens ENSG00000185697 D 0.000
ENSSHAG00000010559 Sarcophilus harrisii ENSSHAG00000010559 I 0.000
MYBL1 Sorex araneus ENSSARG00000006938 I 0.000
MYB Sorex araneus ENSSARG00000002855 I 0.000
ENSSHAG00000014728 Sarcophilus harrisii ENSSHAG00000014728 I 0.000
MYB Sus scrofa ENSSSCG00000004167 I 0.000
ENSSTOG00000006634 Ictidomys tridecemlineatus ENSSTOG00000006634 I 0.000
ENSSTOG00000007581 Ictidomys tridecemlineatus ENSSTOG00000007581 I 0.000
MYB Tupaia belangeri ENSTBEG00000016454 I 0.000
MYBL1 Taeniopygia guttata ENSTGUG00000011289 I 0.000
MYB Taeniopygia guttata ENSTGUG00000011495 I 0.000
mybl1 Tetraodon nigroviridis ENSTNIG00000010104 I 0.000
myb Tetraodon nigroviridis ENSTNIG00000016319 I 0.000
mybl1 Takifugu rubripes ENSTRUG00000008816 I 0.000
myb Takifugu rubripes ENSTRUG00000016069 I 0.000
Myb Rattus norvegicus ENSRNOG00000055858 I 0.000
Mybl1 Rattus norvegicus ENSRNOG00000021669 I 0.000
MYB Pteropus vampyrus ENSPVAG00000007652 I 0.000
mybl1 Oryzias latipes ENSORLG00000008488 I 0.000
myb Oryzias latipes ENSORLG00000016573 I 0.000
ENSPANG00000008051 Papio anubis ENSPANG00000008051 I 0.000
ENSPANG00000018932 Papio anubis ENSPANG00000018932 I 0.000
MYB Procavia capensis ENSPCAG00000009197 I 0.000
MYBL1 Procavia capensis ENSPCAG00000009301 I 0.000
ENSPFOG00000005169 Poecilia formosa ENSPFOG00000005169 I 0.000
ENSPFOG00000011241 Poecilia formosa ENSPFOG00000011241 I 0.000
ENSPMAG00000000117 Petromyzon marinus ENSPMAG00000000117 I 0.000
ENSPMAG00000001639 Petromyzon marinus ENSPMAG00000001639 I 0.000
ENSPPYG00000017028 Pongo abelii ENSPPYG00000017028 I 0.000
ENSPPYG00000018640 Pongo abelii ENSPPYG00000018640 I 0.000
ENSPSIG00000011892 Pelodiscus sinensis ENSPSIG00000011892 I 0.000
ENSPSIG00000011935 Pelodiscus sinensis ENSPSIG00000011935 I 0.000
MYB Pan troglodytes ENSPTRG00000018631 I 0.000
MYBL1 Pan troglodytes ENSPTRG00000020308 I 0.000
ENSTSYG00000014301 Tarsius syrichta ENSTSYG00000014301 I 0.000
MYB Tursiops truncatus ENSTTRG00000003718 I 0.000
Myotis_brandtii_MYB_10035701 Myotis brandtii Myotis_brandtii_MYB_10035701 I 0.000
Myotis_brandtii_MYBL1_10031628 Myotis brandtii Myotis_brandtii_MYBL1_10031628 I 0.000
Ogr00471 Ophisaurus gracilis Ogr00471 I 0.000
Ogr08782 Ophisaurus gracilis Ogr08782 I 0.000
Pvit_15001 Pogona vitticeps Pvit_15001 I 0.000
Pvit_17294 Pogona vitticeps Pvit_17294 I 0.000
Tal_R003498 Tyto alba Tal_R003498 I 0.000
Tal_R007653 Tyto alba Tal_R007653 I 0.000
XP_002166953.1 Hydra magnipapillata XP_002166953.1 I 0.000
estExt_fgenesh2_pg.C_1220082 Branchiostoma floridae estExt_fgenesh2_pg.C_1220082 I 0.000
estExt_fgenesh2_pg.C_1220090 Branchiostoma floridae estExt_fgenesh2_pg.C_1220090 I 0.000
Sakowv30034766m.g Saccoglossus kowalevskii Sakowv30034766m.g I 0.000
myb Xenopus tropicalis XB-GENE-867553 I 0.000
myb.S Xenopus laevis XB-GENE-867566 I 0.000
mybl1 Xenopus tropicalis XB-GENE-986560 I 0.000
mybl1.L Xenopus laevis XB-GENE-986561 I 0.000
Gfo_R006432 Geospiza fortis Gfo_R006432 I 0.000
Gfo_R002003 Geospiza fortis Gfo_R002003 I 0.000
MYBL1 Tursiops truncatus ENSTTRG00000017138 I 0.000
MYBL1 Vicugna pacos ENSVPAG00000004194 I 0.000
ENSXMAG00000001658 Xiphophorus maculatus ENSXMAG00000001658 I 0.000
ENSXMAG00000004392 Xiphophorus maculatus ENSXMAG00000004392 I 0.000
SMAR001262 Strigamia maritima SMAR001262 I 0.000
Aan_R009776 Calypte anna Aan_R009776 I 0.000
Afo_R010364 Aptenodytes forsteri Afo_R010364 I 0.000
Afo_R014904 Aptenodytes forsteri Afo_R014904 I 0.000
Alligator_sinensis_CCG001232.1 Alligator sinensis Alligator_sinensis_CCG001232.1 I 0.000
Alligator_sinensis_CCG012608.1 Alligator sinensis Alligator_sinensis_CCG012608.1 I 0.000
Brh_R005747 Buceros rhinoceros Brh_R005747 I 0.000
Brh_R006445 Buceros rhinoceros Brh_R006445 I 0.000
Cmyd_10011933 Chelonia mydas Cmyd_10011933 I 0.000
ENSP00000339992-D1 Bos grunniens ENSP00000339992-D1 I 0.000
ENSP00000339992 Macaca fascicularis ENSP00000339992 I 0.000
ENSP00000385360 Macaca fascicularis ENSP00000385360 I 0.000
XP_002935855 Xenopus tropicalis XP_002935855 I 0.000
MYB Anolis carolinensis ENSACAG00000009861 I 0.000
ENSCSAG00000014195 Chlorocebus sabaeus ENSCSAG00000014195 I 0.000
ENSCSAG00000016815 Chlorocebus sabaeus ENSCSAG00000016815 I 0.000
mybl1 Danio rerio ENSDARG00000030999 I 0.000
myb Danio rerio ENSDARG00000053666 I 0.000
MYBL1 Dasypus novemcinctus ENSDNOG00000016860 I 0.000
MYB Dasypus novemcinctus ENSDNOG00000047370 I 0.000
MYB Equus caballus ENSECAG00000009918 I 0.000
MYBL1 Equus caballus ENSECAG00000015959 I 0.000
MYB Erinaceus europaeus ENSEEUG00000001468 I 0.000
MYBL1 Echinops telfairi ENSETEG00000009840 I 0.000
ENSFALG00000005444 Ficedula albicollis ENSFALG00000005444 I 0.000
ENSFALG00000011914 Ficedula albicollis ENSFALG00000011914 I 0.000
MYB Felis catus ENSFCAG00000001812 I 0.000
MYBL1 Felis catus ENSFCAG00000031398 I 0.000
mybl1 Gasterosteus aculeatus ENSGACG00000002964 I 0.000
MYB Cavia porcellus ENSCPOG00000014607 I 0.000
MYBL1 Cavia porcellus ENSCPOG00000007578 I 0.000
MYB Callithrix jacchus ENSCJAG00000007798 I 0.000
MYBL1 Anolis carolinensis ENSACAG00000016577 I 0.000
ENSAMEG00000009813 Ailuropoda melanoleuca ENSAMEG00000009813 I 0.000
ENSAMEG00000012401 Ailuropoda melanoleuca ENSAMEG00000012401 I 0.000
ENSAMXG00000004244 Astyanax mexicanus ENSAMXG00000004244 I 0.000
ENSAMXG00000013759 Astyanax mexicanus ENSAMXG00000013759 I 0.000
ENSAPLG00000007728 Anas platyrhynchos ENSAPLG00000007728 I 0.000
ENSAPLG00000014596 Anas platyrhynchos ENSAPLG00000014596 I 0.000
MYBL1 Bos taurus ENSBTAG00000011981 I 0.000
MYB Bos taurus ENSBTAG00000012074 I 0.000
MYB Canis familiaris ENSCAFG00000000230 I 0.000
MYBL1 Canis familiaris ENSCAFG00000007344 I 0.000
MYB Choloepus hoffmanni ENSCHOG00000010472 I 0.000
MYBL1 Choloepus hoffmanni ENSCHOG00000012311 I 0.000
ENSCING00000018880 Ciona intestinalis ENSCING00000018880 I 0.000
MYBL1 Callithrix jacchus ENSCJAG00000004466 I 0.000
myb Gasterosteus aculeatus ENSGACG00000011054 I 0.000
MYB Gallus gallus ENSGALG00000013956 I 0.000
ENSGALG00000015522 Gallus gallus ENSGALG00000015522 I 0.000
MYBL1 Monodelphis domestica ENSMODG00000007964 I 0.000
MYB Monodelphis domestica ENSMODG00000017488 I 0.000
ENSMPUG00000014814 Mustela putorius furo ENSMPUG00000014814 I 0.000
ENSNLEG00000014751 Nomascus leucogenys ENSNLEG00000014751 I 0.000
MYBL1 Ornithorhynchus anatinus ENSOANG00000002308 I 0.000
MYB Ornithorhynchus anatinus ENSOANG00000002777 I 0.000
ENSOARG00000014901 Ovis aries ENSOARG00000014901 I 0.000
ENSOARG00000017663 Ovis aries ENSOARG00000017663 I 0.000
MYB Oryctolagus cuniculus ENSOCUG00000011633 I 0.000
MYBL1 Oryctolagus cuniculus ENSOCUG00000015184 I 0.000
MYB Otolemur garnettii ENSOGAG00000000056 I 0.000
MYBL1 Otolemur garnettii ENSOGAG00000004344 I 0.000
ENSONIG00000000469 Oreochromis niloticus ENSONIG00000000469 I 0.000
ENSONIG00000014188 Oreochromis niloticus ENSONIG00000014188 I 0.000
MYBL1 Ochotona princeps ENSOPRG00000005971 I 0.000
MYB Macaca mulatta ENSMMUG00000018166 I 0.000
MYBL1 Macaca mulatta ENSMMUG00000013974 I 0.000
MYBL1 Myotis lucifugus ENSMLUG00000003166 I 0.000
MYB Gorilla gorilla ENSGGOG00000001379 I 0.000
MYBL1 Gorilla gorilla ENSGGOG00000003892 I 0.000
ENSGMOG00000011856 Gadus morhua ENSGMOG00000011856 I 0.000
ENSGMOG00000017106 Gadus morhua ENSGMOG00000017106 I 0.000
ENSLACG00000002813 Latimeria chalumnae ENSLACG00000002813 I 0.000
ENSLACG00000011097 Latimeria chalumnae ENSLACG00000011097 I 0.000
MYBL1 Loxodonta africana ENSLAFG00000004821 I 0.000
MYB Loxodonta africana ENSLAFG00000018350 I 0.000
ENSLOCG00000004709 Lepisosteus oculatus ENSLOCG00000004709 I 0.000
ENSLOCG00000016218 Lepisosteus oculatus ENSLOCG00000016218 I 0.000
ENSMEUG00000010838 Macropus eugenii ENSMEUG00000010838 I 0.000
MYB Meleagris gallopavo ENSMGAG00000013053 I 0.000
MYB Microcebus murinus ENSMICG00000005531 I 0.000
MYBL1 Microcebus murinus ENSMICG00000009881 I 0.000
MYB Myotis lucifugus ENSMLUG00000002125 I 0.000
MYB Ochotona princeps ENSOPRG00000013639 I 0.000