GSPATT00010696001 (Paramecium tetraurelia)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 GSPATT00010696001 T345453_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN

NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW

WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672 0.587
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN

NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672 0.587
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH

DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672 0.573
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH

DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672 0.573
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN

NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672 0.573
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN

NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672 0.573
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN

NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672 0.573
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN

NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672 0.573
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH

DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672 0.573
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW

WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672 0.573
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW

WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672 0.573
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW

WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672 0.573
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW

WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672 0.573
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA

TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672 0.573
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH

DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672 0.560
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN

NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672 0.560
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN

NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672 0.560
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW

WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672 0.560
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN

NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672 0.560
lin54
M02526_2.00
Danio rerio
NHTYRAAH

DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672 0.547
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH

DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672 0.547
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN

NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672 0.547
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY

RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672 0.547
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH

DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672 0.547
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW

WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672 0.493
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH

DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672 0.480
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH

DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672 0.467
For this family, TFs with SR scores > 0.660 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02530_2.00 TCR/CxC 53 89
M02530_2.00 TCR/CxC 140 177

DNA Binding Domains

Protein ID Domain From To Sequence
CAK74496 TCR/CxC 167 203
CAK74496 TCR/CxC 254 291

Links

Other TCR/CxC family TFs
Other Paramecium tetraurelia TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Hivep2 Mus musculus ENSMUSG00000015501 I 0.000
ENSACAG00000008187 Anolis carolinensis ENSACAG00000008187 N 0.000
HIVEP3 Taeniopygia guttata ENSTGUG00000017331 N 0.000
ENSTRUG00000010896 Takifugu rubripes ENSTRUG00000010896 N 0.000
ENSTSYG00000014718 Tarsius syrichta ENSTSYG00000014718 N 0.000
ENSXMAG00000015773 Xiphophorus maculatus ENSXMAG00000015773 N 0.000
GJ17675 Drosophila virilis FBgn0204844 N 0.000
NV31766 Nasonia vitripennis NV31766 N 0.000
Alligator_sinensis_CCG009304.1 Alligator sinensis Alligator_sinensis_CCG009304.1 N 0.000
Brh_R000375 Buceros rhinoceros Brh_R000375 N 0.000
Cflo_09125--XP_001121731.1_APIME Camponotus floridanus Cflo_09125--XP_001121731.1_APIME N 0.000
Gfo_R008964 Geospiza fortis Gfo_R008964 N 0.000
Tal_R002635 Tyto alba Tal_R002635 N 0.000
LLOJ000479 Lutzomyia longipalpis LLOJ000479 N 0.000
ENSSTOG00000014879 Ictidomys tridecemlineatus ENSSTOG00000014879 N 0.000
HIVEP2 Sorex araneus ENSSARG00000005468 N 0.000
ENSAMXG00000000714 Astyanax mexicanus ENSAMXG00000000714 N 0.000
HIVEP3 Choloepus hoffmanni ENSCHOG00000012407 N 0.000
HIVEP3 Callithrix jacchus ENSCJAG00000015848 N 0.000
Hivep3 Dipodomys ordii ENSDORG00000006074 N 0.000
HIVEP3 Erinaceus europaeus ENSEEUG00000014689 N 0.000
HIVEP2 Echinops telfairi ENSETEG00000018336 N 0.000
ENSGMOG00000005293 Gadus morhua ENSGMOG00000005293 N 0.000
ENSGMOG00000006318 Gadus morhua ENSGMOG00000006318 N 0.000
HIVEP3 Ochotona princeps ENSOPRG00000003135 N 0.000
HIVEP1 Procavia capensis ENSPCAG00000007961 N 0.000
ENSPFOG00000003107 Poecilia formosa ENSPFOG00000003107 N 0.000
ENSSARG00000001213 Sorex araneus ENSSARG00000001213 N 0.000
LLOJ003078 Lutzomyia longipalpis LLOJ003078 N 0.000