LPERR05G23340 (Leersia perrieri)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 LPERR05G23340 T345527_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN

NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672 0.538
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY

RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672 0.523
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH

DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672 0.508
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW

WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672 0.508
lin54
M02526_2.00
Danio rerio
NHTYRAAH

DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672 0.508
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN

NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672 0.508
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH

DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672 0.492
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN

NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672 0.492
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN

NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672 0.477
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN

NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672 0.477
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN

NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672 0.477
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH

DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672 0.477
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH

DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672 0.477
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN

NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
0.672 0.462
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH

DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672 0.446
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH

DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672 0.446
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN

NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672 0.446
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW

WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672 0.446
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW

WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672 0.446
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW

WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672 0.446
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW

WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672 0.446
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA

TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672 0.446
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH

DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672 0.431
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN

NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672 0.431
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH

DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672 0.431
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW

WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672 0.431
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN

NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672 0.431
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW

WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672 0.400
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR05G23340.1 TCR/CxC 18 44
LPERR05G23340.1 TCR/CxC 106 143

Links

Other TCR/CxC family TFs
Other Leersia perrieri TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000011233 Ailuropoda melanoleuca ENSAMEG00000011233 I 0.000
ENSBTAP00000037032-D1 Bos grunniens ENSBTAP00000037032-D1 I 0.000
ENSCSAG00000017832 Chlorocebus sabaeus ENSCSAG00000017832 I 0.000
ENSMEUG00000013213 Macropus eugenii ENSMEUG00000013213 I 0.000
ENSMPUG00000010891 Mustela putorius furo ENSMPUG00000010891 I 0.000
ENSOARG00000017937 Ovis aries ENSOARG00000017937 I 0.000
ENSP00000415358 Macaca fascicularis ENSP00000415358 I 0.000
ENSPANG00000011255 Papio anubis ENSPANG00000011255 I 0.000
ENSSHAG00000011938 Sarcophilus harrisii ENSSHAG00000011938 I 0.000
ENSSTOG00000028734 Ictidomys tridecemlineatus ENSSTOG00000028734 I 0.000
ENSTSYG00000013704 Tarsius syrichta ENSTSYG00000013704 I 0.000
Zfp113 Dipodomys ordii ENSDORG00000000945 I 0.000
Zfp113 Mus musculus ENSMUSG00000037007 I 0.000
Zfp113 Rattus norvegicus ENSRNOG00000001341 I 0.000
ZNF3 Tupaia belangeri ENSTBEG00000013905 I 0.000
ZNF3 Pteropus vampyrus ENSPVAG00000005182 I 0.000
ZNF3 Pan troglodytes ENSPTRG00000019470 I 0.000
ZNF3 Procavia capensis ENSPCAG00000015736 I 0.000
ZNF3 Tursiops truncatus ENSTTRG00000012311 I 0.000
ZNF3 Ochotona princeps ENSOPRG00000003308 I 0.000
ZNF3 Bos taurus ENSBTAG00000007012 I 0.000
ZNF3 Otolemur garnettii ENSOGAG00000006409 I 0.000
ZNF3 Oryctolagus cuniculus ENSOCUG00000005390 I 0.000
ZNF3 Canis familiaris ENSCAFG00000018472 I 0.000
ZNF3 Equus caballus ENSECAG00000024649 I 0.000
ZNF3 Erinaceus europaeus ENSEEUG00000003422 I 0.000
ZNF3 Echinops telfairi ENSETEG00000002679 I 0.000
ZNF3 Felis catus ENSFCAG00000003560 I 0.000
ZNF3 Homo sapiens ENSG00000166526 D 0.000
ZNF3 Loxodonta africana ENSLAFG00000014618 I 0.000
ZNF3 Dasypus novemcinctus ENSDNOG00000010382 I 0.000
ZNF3 Microcebus murinus ENSMICG00000003962 I 0.000
ZNF3 Myotis lucifugus ENSMLUG00000004466 I 0.000
ZNF3 Macaca mulatta ENSMMUG00000004021 I 0.000
ZNF3 Cavia porcellus ENSCPOG00000010860 I 0.000
ZNF3 Callithrix jacchus ENSCJAG00000015656 I 0.000
ZNF3 Monodelphis domestica ENSMODG00000004159 I 0.000