TRIUR3_20719 (Triticum urartu)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 TRIUR3_20719 T345863_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN

NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672 0.474
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY

RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672 0.461
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW

WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672 0.461
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW

WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672 0.461
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA

TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672 0.461
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH

DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672 0.447
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH

DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672 0.447
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW

WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672 0.447
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN

NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672 0.447
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN

NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672 0.447
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN

NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672 0.447
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN

NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672 0.447
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW

WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672 0.447
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW

WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672 0.447
lin54
M02526_2.00
Danio rerio
NHTYRAAH

DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672 0.434
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH

DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672 0.434
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH

DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672 0.434
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN

NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672 0.434
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH

DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672 0.421
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH

DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672 0.408
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN

NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672 0.408
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN

NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672 0.408
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN

NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
0.672 0.408
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH

DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672 0.408
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW

WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672 0.408
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN

NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672 0.408
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW

WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672 0.395
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH

DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672 0.355
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRIUR3_20719-P1 TCR/CxC 16 61
TRIUR3_20719-P1 TCR/CxC 69 106

Links

Other TCR/CxC family TFs
Other Triticum urartu TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29788.m000340 Ricinus communis 29788.m000340 I 0.000
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I 0.000
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I 0.000
AtMYB27 Vitis vinifera VIT_08s0007g04830 I 0.000
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I 0.000
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.000
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I 0.000
BGIOSGA005283 Oryza indica BGIOSGA005283 I 0.000
BGIOSGA019054 Oryza indica BGIOSGA019054 I 0.000
BGIOSGA033532 Oryza indica BGIOSGA033532 I 0.000
BGIOSGA035986 Oryza indica BGIOSGA035986 I 0.000
Bo2g025410 Brassica oleracea Bo2g025410 I 0.000
Bo3g130340 Brassica oleracea Bo3g130340 I 0.000
Bo8g082570 Brassica oleracea Bo8g082570 I 0.000
Bo9g140750 Brassica oleracea Bo9g140750 I 0.000
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.000
Bra002533 Brassica rapa Bra002533 I 0.000
Bra006694 Brassica rapa Bra006694 I 0.000
Bra018223 Brassica rapa Bra018223 I 0.000
Bra020289 Brassica rapa Bra020289 I 0.000
BRADI2G37377 Brachypodium distachyon BRADI2G37377 I 0.000
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I 0.000
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.000
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.000
Carubv10017875m.g Capsella rubella Carubv10017875m.g I 0.000
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.000
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I 0.000
Ca_02593 Cicer arietinum Ca_02593 I 0.000
Cla008413 Citrullus lanatus Cla008413 I 0.000
Cla013488 Citrullus lanatus Cla013488 I 0.000
Cucsa.213500 Cucumis sativus Cucsa.213500 I 0.000
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.000
evm.TU.supercontig_190.35 Carica papaya evm.TU.supercontig_190.35 I 0.000
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I 0.000
F775_06315 Aegilops tauschii F775_06315 I 0.000
F775_14172 Aegilops tauschii F775_14172 I 0.000
F775_28589 Aegilops tauschii F775_28589 I 0.000
F775_29427 Aegilops tauschii F775_29427 I 0.000
GLYMA10G06680 Glycine max GLYMA10G06680 N 0.000
GLYMA13G40830 Glycine max GLYMA13G40830 I 0.000
GLYMA15G04620 Glycine max GLYMA15G04620 I 0.000
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.000
Gorai.003G136400 Gossypium raimondii Gorai.003G136400 I 0.000
Gorai.004G145800 Gossypium raimondii Gorai.004G145800 I 0.000
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I 0.000
GRMZM2G013581 Zea mays GRMZM2G013581 N 0.000
GRMZM2G047626 Zea mays GRMZM2G047626 I 0.000
GRMZM2G048136 Zea mays GRMZM2G048136 I 0.000
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.000
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.000
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I 0.000
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I 0.000
GSMUA_Achr10G26730_001 Musa acuminata GSMUA_Achr10G26730_001 I 0.000
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.000
GSMUA_Achr2G16200_001 Musa acuminata GSMUA_Achr2G16200_001 I 0.000
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.000
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I 0.000
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.000
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I 0.000
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I 0.000
GSMUA_Achr9G28370_001 Musa acuminata GSMUA_Achr9G28370_001 I 0.000
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.000
LPERR05G01030 Leersia perrieri LPERR05G01030 I 0.000
LPERR12G13390 Leersia perrieri LPERR12G13390 I 0.000
Lus10005886.g Linum usitatissimum Lus10005886.g I 0.000
MDP0000143156 Malus domestica MDP0000143156 I 0.000
MDP0000177010 Malus domestica MDP0000177010 I 0.000
mgf020363m Mimulus guttatus mgf020363m I 0.000
mgf025691m Mimulus guttatus mgf025691m I 0.000
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.000
MLOC_78504 Hordeum vulgare MLOC_78504 I 0.000
MTR_1g062940 Medicago truncatula MTR_1g062940 N 0.000
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.000
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.000
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I 0.000
MYB59 Arabidopsis thaliana AT5G59780 D 0.000
MYBAS1 Oryza sativa OS11G0700500 I 0.000
MYBAS2 Oryza sativa OS12G0567300 I 0.000
OB01G54920 Oryza brachyantha OB01G54920 I 0.000
OB05G11070 Oryza brachyantha OB05G11070 I 0.000
OB11G27690 Oryza brachyantha OB11G27690 I 0.000
OB12G23080 Oryza brachyantha OB12G23080 I 0.000
OBART01G45730 Oryza barthii OBART01G45730 I 0.000
OBART05G01080 Oryza barthii OBART05G01080 I 0.000
OGLUM05G01090 Oryza glumaepatula OGLUM05G01090 I 0.000
OMERI05G01150 Oryza meridionalis OMERI05G01150 I 0.000
ONIVA05G01120 Oryza nivara ONIVA05G01120 I 0.000
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.000
OPUNC05G00970 Oryza punctata OPUNC05G00970 I 0.000
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.000
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.000
ORGLA11G0187400 Oryza glaberrima ORGLA11G0187400 I 0.000
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I 0.000
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I 0.000
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.000
ORUFI05G01110 Oryza rufipogon ORUFI05G01110 I 0.000
ORUFI11G25190 Oryza rufipogon ORUFI11G25190 I 0.000
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I 0.000
Pavir.Ca00653 Panicum virgatum Pavir.Ca00653 I 0.000
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.000
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.000
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I 0.000
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I 0.000
Pavir.J04129 Panicum virgatum Pavir.J04129 I 0.000
Pavir.J08441 Panicum virgatum Pavir.J08441 I 0.000
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.000
Pavir.J11826 Panicum virgatum Pavir.J11826 I 0.000
Pavir.J33560 Panicum virgatum Pavir.J33560 I 0.000
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.000
PGSC0003DMG400015536 Solanum tuberosum PGSC0003DMG400015536 I 0.000
Pm000809 Prunus mume Pm000809 I 0.000
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I 0.000
POPTR_0009s03240 Populus trichocarpa POPTR_0009s03240 I 0.000
PRUPE_ppa015954mg Prunus persica PRUPE_ppa015954mg I 0.000
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I 0.000
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I 0.000
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.000
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.000
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.000
Sb09g001590 Sorghum bicolor Sb09g001590 I 0.000
Si022826m.g Setaria italica Si022826m.g I 0.000
Si023104m.g Setaria italica Si023104m.g I 0.000
Si024470m.g Setaria italica Si024470m.g I 0.000
Si026803m.g Setaria italica Si026803m.g I 0.000
Solyc06g005330.2 Solanum lycopersicum Solyc06g005330.2 I 0.000
Solyc11g073120.1 Solanum lycopersicum Solyc11g073120.1 I 0.000
TCM_041904 Theobroma cacao TCM_041904 I 0.000
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I 0.000
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I 0.000
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.000
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I 0.000
Traes_1BS_B44ECE28C Triticum aestivum Traes_1BS_B44ECE28C I 0.000
Traes_1DS_47E2D90AC Triticum aestivum Traes_1DS_47E2D90AC I 0.000
Traes_1DS_47E2D90AC1 Triticum aestivum Traes_1DS_47E2D90AC1 I 0.000
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I 0.000
Traes_4AL_8B52D54FD Triticum aestivum Traes_4AL_8B52D54FD I 0.000
Traes_4BS_61B30E3E4 Triticum aestivum Traes_4BS_61B30E3E4 I 0.000
Traes_4DS_0ECE7A421 Triticum aestivum Traes_4DS_0ECE7A421 I 0.000
TRIUR3_16687 Triticum urartu TRIUR3_16687 I 0.000
TRIUR3_16862 Triticum urartu TRIUR3_16862 I 0.000
TRIUR3_22432 Triticum urartu TRIUR3_22432 I 0.000
VIT_06s0004g04140 Vitis vinifera VIT_06s0004g04140 I 0.000