Myotis_brandtii_LIN54_10030142 (Myotis brandtii)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03638 (TCR) IPR005172 Myotis_brandtii_LIN54_10030142 T345917_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH

DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672 0.987
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN

NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672 0.947
lin54
M02526_2.00
Danio rerio
NHTYRAAH

DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672 0.920
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH

DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672 0.880
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN

NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672 0.840
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN

NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672 0.827
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW

WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672 0.813
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY

RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672 0.800
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH

DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672 0.680
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN

NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672 0.667
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH

DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672 0.653
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN

NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672 0.653
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW

WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672 0.653
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN

NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672 0.653
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN

NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672 0.600
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH

DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672 0.587
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH

DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672 0.587
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW

WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672 0.587
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW

WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672 0.587
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW

WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672 0.573
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW

WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672 0.573
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH

DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672 0.560
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN

NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672 0.560
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN

NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672 0.560
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN

NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
0.672 0.547
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW

WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672 0.547
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA

TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672 0.547
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH

DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672 0.533
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_LIN54_10030142 TCR/CxC 462 498
Myotis_brandtii_LIN54_10030142 TCR/CxC 536 573

Links

Other TCR/CxC family TFs
Other Myotis brandtii TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCEY_00370 Ancylostoma ceylanicum ANCCEY_00370 I 0.000
BXY_1106000 Bursaphelenchus xylophilus BXY_1106000 I 0.000
CGI_10016115 Crassostrea gigas CGI_10016115 I 0.000
CGI_10016117 Crassostrea gigas CGI_10016117 I 0.000
Cmyd_10016551 Chelonia mydas Cmyd_10016551 I 0.000
csin109208 Clonorchis sinensis csin109208 I 0.000
DAPPUDRAFT_290567 Daphnia pulex DAPPUDRAFT_290567 I 0.000
ENSACAG00000003701 Anolis carolinensis ENSACAG00000003701 I 0.000
ENSAMXG00000000658 Astyanax mexicanus ENSAMXG00000000658 I 0.000
ENSAMXG00000012318 Astyanax mexicanus ENSAMXG00000012318 I 0.000
macho1 Ciona intestinalis ENSCING00000007968 I 0.000
ENSCSAVG00000001907 Ciona savignyi ENSCSAVG00000001907 I 0.000
zic6 Danio rerio ENSDARG00000071496 I 0.000
ENSDORG00000012706 Dipodomys ordii ENSDORG00000012706 I 0.000
ENSGMOG00000004419 Gadus morhua ENSGMOG00000004419 I 0.000
ENSMMUP00000019456 Macaca fascicularis ENSMMUP00000019456 I 0.000
ZIC1 Monodelphis domestica ENSMODG00000021251 I 0.000
ENSOANG00000012152 Ornithorhynchus anatinus ENSOANG00000012152 I 0.000
ZIC5 Oryctolagus cuniculus ENSOCUG00000026498 I 0.000
ENSONIG00000002719 Oreochromis niloticus ENSONIG00000002719 I 0.000
ZIC5 Ochotona princeps ENSOPRG00000007526 I 0.000
ENSPFOG00000012980 Poecilia formosa ENSPFOG00000012980 I 0.000
ENSPFOG00000023954 Poecilia formosa ENSPFOG00000023954 I 0.000
ENSPPYG00000005471 Pongo abelii ENSPPYG00000005471 I 0.000
ENSPSIG00000011885 Pelodiscus sinensis ENSPSIG00000011885 I 0.000
ENSSHAG00000015025 Sarcophilus harrisii ENSSHAG00000015025 I 0.000
ZIC5 Sus scrofa ENSSSCG00000009521 I 0.000
ENSXMAG00000014868 Xiphophorus maculatus ENSXMAG00000014868 I 0.000
opa Drosophila melanogaster FBgn0003002 D 0.000
GA10924 Drosophila pseudoobscura FBgn0070980 I 0.000
GF18915 Drosophila ananassae FBgn0095929 I 0.000
GG12590 Drosophila erecta FBgn0104878 I 0.000
GH23039 Drosophila grimshawi FBgn0130496 I 0.000
GI10245 Drosophila mojavensis FBgn0133010 I 0.000
GL21621 Drosophila persimilis FBgn0159214 I 0.000
GM10780 Drosophila sechellia FBgn0165726 I 0.000
GD19752 Drosophila simulans FBgn0191241 I 0.000
GJ11051 Drosophila virilis FBgn0198317 I 0.000
GK13239 Drosophila willistoni FBgn0215248 I 0.000
KGM_22387 Danaus plexippus KGM_22387 I 0.000
MDOA000052 Musca domestica MDOA000052 I 0.000
NEMVEDRAFT_v1g25267 Nematostella vectensis NEMVEDRAFT_v1g25267 I 0.000
nLs.2.1.2.g02824 Litomosoides sigmodontis nLs.2.1.2.g02824 I 0.000
nRc.2.0.1.g22468 Romanomermis culicivorax nRc.2.0.1.g22468 I 0.000
Ogr17257 Ophisaurus gracilis Ogr17257 I 0.000
PTRK_0000799900 Parastrongyloides trichosuri PTRK_0000799900 I 0.000
Pvit_01334 Pogona vitticeps Pvit_01334 I 0.000
RSKR_0001155900 Rhabditophanes kr3021 RSKR_0001155900 I 0.000
Sakowv30026420m.g Saccoglossus kowalevskii Sakowv30026420m.g I 0.000
T265_00048 Opisthorchis viverrini T265_00048 I 0.000
TC010234 Tribolium castaneum TC010234 I 0.000
tetur11g00650 Tetranychus urticae tetur11g00650 I 0.000
TMUE_s0101002100 Trichuris muris TMUE_s0101002100 I 0.000
XP_002153782.1 Hydra magnipapillata XP_002153782.1 I 0.000
XP_002159358.1 Hydra magnipapillata XP_002159358.1 I 0.000