Pm020071 (Prunus mume)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03638 (TCR) IPR005172 Pm020071 T345928_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW

WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672 0.225
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW

WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672 0.213
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY

RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672 0.213
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN

NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672 0.213
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH

DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672 0.213
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN

NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672 0.213
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN

NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672 0.213
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH

DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672 0.213
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN

NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672 0.203
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH

DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672 0.203
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH

DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672 0.200
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN

NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672 0.200
lin54
M02526_2.00
Danio rerio
NHTYRAAH

DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672 0.200
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH

DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672 0.200
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW

WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672 0.200
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN

NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672 0.200
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA

TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672 0.200
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH

DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672 0.197
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH

DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672 0.197
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH

DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672 0.197
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN

NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672 0.197
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN

NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672 0.197
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW

WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672 0.197
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW

WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672 0.197
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW

WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672 0.197
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW

WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672 0.197
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN

NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672 0.187
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN

NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
0.672 0.187
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm020071 TCR/CxC 692 728

Links

Other TCR/CxC family TFs
Other Prunus mume TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000012362 Ailuropoda melanoleuca ENSAMEG00000012362 I 0.000
ENSAMEG00000014505 Ailuropoda melanoleuca ENSAMEG00000014505 I 0.000
Alligator_sinensis_CCG021121.1 Alligator sinensis Alligator_sinensis_CCG021121.1 I 0.000
ENSAPLG00000005793 Anas platyrhynchos ENSAPLG00000005793 I 0.000
ENSAPLG00000008295 Anas platyrhynchos ENSAPLG00000008295 I 0.000
BNC2 Anolis carolinensis ENSACAG00000017743 I 0.000
Afo_R010797 Aptenodytes forsteri Afo_R010797 I 0.000
Afo_R000157 Aptenodytes forsteri Afo_R000157 I 0.000
ENSAMXG00000015422 Astyanax mexicanus ENSAMXG00000015422 I 0.000
ENSP00000370047-D1 Bos grunniens ENSP00000370047-D1 I 0.000
ENSP00000307041-D1 Bos grunniens ENSP00000307041-D1 I 0.000
BNC1 Bos taurus ENSBTAG00000015462 I 0.000
Brh_R001745 Buceros rhinoceros Brh_R001745 I 0.000
Brh_R009468 Buceros rhinoceros Brh_R009468 I 0.000
BNC2 Callithrix jacchus ENSCJAG00000012578 I 0.000
BNC1 Callithrix jacchus ENSCJAG00000015761 I 0.000
Aan_R015566 Calypte anna Aan_R015566 I 0.000
Aan_R013848 Calypte anna Aan_R013848 I 0.000
BNC2 Canis familiaris ENSCAFG00000001562 I 0.000
BNC1 Canis familiaris ENSCAFG00000013219 I 0.000
BNC1 Cavia porcellus ENSCPOG00000009045 I 0.000
BNC2 Cavia porcellus ENSCPOG00000006163 I 0.000
Cmyd_10011034 Chelonia mydas Cmyd_10011034 I 0.000
Cmyd_10014086 Chelonia mydas Cmyd_10014086 I 0.000
ENSCSAG00000009282 Chlorocebus sabaeus ENSCSAG00000009282 I 0.000
ENSCSAG00000017303 Chlorocebus sabaeus ENSCSAG00000017303 I 0.000
BNC2 Choloepus hoffmanni ENSCHOG00000006932 I 0.000
bnc2 Danio rerio ENSDARG00000069989 I 0.000
ENSDNOG00000040600 Dasypus novemcinctus ENSDNOG00000040600 I 0.000
BNC1 Dasypus novemcinctus ENSDNOG00000010537 I 0.000
Bnc1 Dipodomys ordii ENSDORG00000001268 I 0.000
Bnc2 Dipodomys ordii ENSDORG00000008840 I 0.000
BNC2 Echinops telfairi ENSETEG00000004420 I 0.000
BNC1 Echinops telfairi ENSETEG00000005529 I 0.000
BNC1 Equus caballus ENSECAG00000017409 I 0.000
BNC2 Equus caballus ENSECAG00000017503 I 0.000
BNC1 Erinaceus europaeus ENSEEUG00000013292 I 0.000
BNC2 Erinaceus europaeus ENSEEUG00000002527 I 0.000
BNC2 Felis catus ENSFCAG00000027700 I 0.000
ENSFALG00000003044 Ficedula albicollis ENSFALG00000003044 I 0.000
ENSFALG00000011147 Ficedula albicollis ENSFALG00000011147 I 0.000
BNC2 Gallus gallus ENSGALG00000015101 I 0.000
BNC1 Gallus gallus ENSGALG00000006041 I 0.000
bnc2 Gasterosteus aculeatus ENSGACG00000017398 I 0.000
Gfo_R004238 Geospiza fortis Gfo_R004238 I 0.000
Gfo_R001923 Geospiza fortis Gfo_R001923 I 0.000
BNC1 Gorilla gorilla ENSGGOG00000006610 I 0.000
BNC2 Gorilla gorilla ENSGGOG00000004532 I 0.000
BNC1 Homo sapiens ENSG00000169594 I 0.000
BNC2 Homo sapiens ENSG00000173068 I 0.000
ENSSTOG00000019904 Ictidomys tridecemlineatus ENSSTOG00000019904 I 0.000
ENSSTOG00000011561 Ictidomys tridecemlineatus ENSSTOG00000011561 I 0.000
ENSLACG00000017528 Latimeria chalumnae ENSLACG00000017528 I 0.000
ENSLOCG00000011896 Lepisosteus oculatus ENSLOCG00000011896 I 0.000
ENSLOCG00000012902 Lepisosteus oculatus ENSLOCG00000012902 I 0.000
BNC2 Loxodonta africana ENSLAFG00000000476 I 0.000
BNC1 Loxodonta africana ENSLAFG00000000536 I 0.000
ENSP00000370047 Macaca fascicularis ENSP00000370047 I 0.000
ENSP00000307041 Macaca fascicularis ENSP00000307041 I 0.000
BNC1 Macaca mulatta ENSMMUG00000008188 I 0.000
BNC2 Macaca mulatta ENSMMUG00000001141 I 0.000
ENSMEUG00000016184 Macropus eugenii ENSMEUG00000016184 I 0.000
ENSMEUG00000012369 Macropus eugenii ENSMEUG00000012369 I 0.000
BNC1 Meleagris gallopavo ENSMGAG00000007844 I 0.000
BNC1 Microcebus murinus ENSMICG00000015019 I 0.000
BNC2 Monodelphis domestica ENSMODG00000014900 I 0.000
BNC1 Monodelphis domestica ENSMODG00000019380 I 0.000
ENSMPUG00000015509 Mustela putorius furo ENSMPUG00000015509 I 0.000
ENSMPUG00000004030 Mustela putorius furo ENSMPUG00000004030 I 0.000
Bnc2 Mus musculus ENSMUSG00000028487 I 0.000
Bnc1 Mus musculus ENSMUSG00000025105 D 0.000
Myotis_brandtii_BNC1_10013186 Myotis brandtii Myotis_brandtii_BNC1_10013186 I 0.000
Myotis_brandtii_BNC2_10027298 Myotis brandtii Myotis_brandtii_BNC2_10027298 I 0.000
BNC1 Myotis lucifugus ENSMLUG00000014956 I 0.000
BNC2 Myotis lucifugus ENSMLUG00000004109 I 0.000
ENSNLEG00000017578 Nomascus leucogenys ENSNLEG00000017578 I 0.000
ENSNLEG00000010826 Nomascus leucogenys ENSNLEG00000010826 I 0.000
BNC2 Ochotona princeps ENSOPRG00000012145 I 0.000
BNC1 Ochotona princeps ENSOPRG00000012498 I 0.000
Ogr06244 Ophisaurus gracilis Ogr06244 I 0.000
ENSOANG00000004079 Ornithorhynchus anatinus ENSOANG00000004079 I 0.000
BNC2 Ornithorhynchus anatinus ENSOANG00000012860 I 0.000
BNC1 Oryctolagus cuniculus ENSOCUG00000000136 I 0.000
BNC2 Oryctolagus cuniculus ENSOCUG00000004460 I 0.000
BNC2 Otolemur garnettii ENSOGAG00000001628 I 0.000
BNC1 Otolemur garnettii ENSOGAG00000012148 I 0.000
ENSOARG00000014059 Ovis aries ENSOARG00000014059 I 0.000
ENSOARG00000014185 Ovis aries ENSOARG00000014185 I 0.000
BNC1 Pan troglodytes ENSPTRG00000007392 I 0.000
BNC2 Pan troglodytes ENSPTRG00000020789 I 0.000
ENSPANG00000015607 Papio anubis ENSPANG00000015607 I 0.000
ENSPANG00000025234 Papio anubis ENSPANG00000025234 I 0.000
ENSPSIG00000007268 Pelodiscus sinensis ENSPSIG00000007268 I 0.000
ENSPSIG00000018240 Pelodiscus sinensis ENSPSIG00000018240 I 0.000
ENSPMAG00000002267 Petromyzon marinus ENSPMAG00000002267 I 0.000
Pvit_13632 Pogona vitticeps Pvit_13632 I 0.000
Pvit_01426 Pogona vitticeps Pvit_01426 I 0.000
ENSPPYG00000019203 Pongo abelii ENSPPYG00000019203 I 0.000
BNC2 Procavia capensis ENSPCAG00000000849 I 0.000
BNC2 Pteropus vampyrus ENSPVAG00000015905 I 0.000
BNC1 Pteropus vampyrus ENSPVAG00000008256 I 0.000
Bnc1 Rattus norvegicus ENSRNOG00000019770 I 0.000
Bnc2 Rattus norvegicus ENSRNOG00000006553 I 0.000
ENSSHAG00000018273 Sarcophilus harrisii ENSSHAG00000018273 I 0.000
BNC2 Sorex araneus ENSSARG00000012472 I 0.000
ENSSSCG00000025613 Sus scrofa ENSSSCG00000025613 I 0.000
BNC2 Sus scrofa ENSSSCG00000005180 I 0.000
BNC1 Sus scrofa ENSSSCG00000001798 I 0.000
BNC2 Taeniopygia guttata ENSTGUG00000004482 I 0.000
BNC1 Taeniopygia guttata ENSTGUG00000007753 I 0.000
ENSTSYG00000007392 Tarsius syrichta ENSTSYG00000007392 I 0.000
ENSTSYG00000004934 Tarsius syrichta ENSTSYG00000004934 I 0.000
BNC1 Tupaia belangeri ENSTBEG00000009591 I 0.000
BNC1 Tursiops truncatus ENSTTRG00000004952 I 0.000
BNC2 Tursiops truncatus ENSTTRG00000013676 I 0.000
Tal_R008092 Tyto alba Tal_R008092 I 0.000
Tal_R005923 Tyto alba Tal_R005923 I 0.000
BNC1 Vicugna pacos ENSVPAG00000004601 I 0.000
bnc1 Xenopus tropicalis XB-GENE-1217655 I 0.000
bnc2 Xenopus tropicalis XB-GENE-953157 I 0.000