DICVIV_09262 (Dictyocaulus viviparus)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03638 (TCR) IPR005172 DICVIV_09262 T346263_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY

RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672 0.800
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN

NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672 0.800
lin54
M02526_2.00
Danio rerio
NHTYRAAH

DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672 0.773
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH

DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672 0.773
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN

NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672 0.773
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW

WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672 0.760
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH

DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672 0.760
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN

NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672 0.747
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN

NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672 0.653
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH

DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672 0.627
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN

NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672 0.627
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW

WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672 0.627
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN

NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672 0.627
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN

NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672 0.613
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH

DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672 0.613
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH

DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672 0.560
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW

WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672 0.560
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW

WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672 0.560
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH

DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672 0.547
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH

DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672 0.547
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN

NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672 0.547
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN

NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
0.672 0.547
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW

WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672 0.547
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW

WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672 0.547
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA

TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672 0.547
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN

NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672 0.533
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW

WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672 0.533
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH

DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672 0.520
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
DICVIV_09262 TCR/CxC 197 233
DICVIV_09262 TCR/CxC 272 309

Links

Other TCR/CxC family TFs
Other Dictyocaulus viviparus TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.000
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.000
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.000
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.000
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.000
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.000
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.000
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.000
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.000
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.000
DREB1C Arabidopsis thaliana AT4G25470 D 0.000
DREB1A Arabidopsis thaliana AT4G25480 D 0.000
DREB1D Arabidopsis thaliana AT5G51990 D 0.000
DREB1F Arabidopsis thaliana AT1G12610 D 0.000
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.000
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.000
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.000
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.000
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.000
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.000
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.000
Bo8g108050 Brassica oleracea Bo8g108050 I 0.000
Bo9g104770 Brassica oleracea Bo9g104770 I 0.000
Bo01335s010 Brassica oleracea Bo01335s010 I 0.000
Bra026963 Brassica rapa Bra026963 I 0.000
Bra016763 Brassica rapa Bra016763 I 0.000
Bra028290 Brassica rapa Bra028290 I 0.000
PK23332.1 Cannabis sativa PK23332.1 I 0.000
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.000
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.000
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.000
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.000
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.000
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.000
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.000
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.000
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.000
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.000
Ca_03665 Cicer arietinum Ca_03665 N 0.000
Ca_08732 Cicer arietinum Ca_08732 I 0.000
Ca_18948 Cicer arietinum Ca_18948 I 0.000
Ca_02407 Cicer arietinum Ca_02407 N 0.000
Cla006315 Citrullus lanatus Cla006315 I 0.000
Cla011674 Citrullus lanatus Cla011674 I 0.000
Cla002362 Citrullus lanatus Cla002362 I 0.000
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.000
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.000
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.000
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.000
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.000
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.000
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.000
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.000
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.000
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.000
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.000
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.000
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.000
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.000
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.000
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.000
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.000
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.000
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.000
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.000
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.000
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.000
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.000
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.000
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.000
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.000
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.000
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.000
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.000
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.000
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.000
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.000
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.000
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.000
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.000
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.000
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.000
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.000
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.000
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.000
LjSGA_077560.1 Lotus japonicus LjSGA_077560.1 N 0.000
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.000
MDP0000154764 Malus domestica MDP0000154764 I 0.000
MDP0000198054 Malus domestica MDP0000198054 I 0.000
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.000
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.000
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.000
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.000
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.000
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.000
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.000
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.000
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.000
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.000
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.000
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.000
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.000
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.000
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.000
MTR_5g010940 Medicago truncatula MTR_5g010940 N 0.000
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.000
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.000
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.000
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.000
MTR_5g010910 Medicago truncatula MTR_5g010910 N 0.000
mgf019061m Mimulus guttatus mgf019061m I 0.000
mgf026339m Mimulus guttatus mgf026339m I 0.000
mgf026642m Mimulus guttatus mgf026642m I 0.000
mgf017136m Mimulus guttatus mgf017136m I 0.000
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.000
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.000
OBART02G27760 Oryza barthii OBART02G27760 I 0.000
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.000
DREB1G Oryza indica BGIOSGA008804 I 0.000
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.000
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.000
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.000
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.000
DREB1G Oryza sativa OS02G0677300 D 0.000
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.000
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.000
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.000
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.000
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.000
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.000
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.000
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.000
Pm023769 Prunus mume Pm023769 I 0.000
Pm023772 Prunus mume Pm023772 I 0.000
Pm023775 Prunus mume Pm023775 I 0.000
Pm023777 Prunus mume Pm023777 N 0.000
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.000
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.000
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.000
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.000
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.000
60638.m00016 Ricinus communis 60638.m00016 I 0.000
30190.m011120 Ricinus communis 30190.m011120 I 0.000
30190.m011119 Ricinus communis 30190.m011119 I 0.000
30147.m014313 Ricinus communis 30147.m014313 I 0.000
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.000
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.000
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.000
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.000
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.000
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.000
Si018262m.g Setaria italica Si018262m.g I 0.000
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.000
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.000
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.000
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.000
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.000
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.000
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.000
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.000
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.000
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.000
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.000
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.000
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.000
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.000
TCM_016175 Theobroma cacao TCM_016175 I 0.000
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.000
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.000
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.000
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.000
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.000