lin-15B (Caenorhabditis elegans)
THAP finger

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05485 (THAP) IPR006612 WBGene00023497 T349258_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA binding activity and metal ion binding activity. Involved in negative regulation of Ras protein signal transduction; negative regulation of vulval development; and regulation of cell fate specification. Is expressed in several structures, including anal region; germ line; head muscle; oocyte; and somatic cell. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-15B
M09654_2.00		 Caenorhabditis elegans
CRRTRGAGCGCRYTTGCWNH
DNWGCAARYGCGCTCYAYYG		 Misc
Heinz et al.(2010)
cElegans-L3-LIN15B_modEncode		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ZK662.4.1 THAP finger 1138 1212
ZK662.4.2 THAP finger 1138 1212

Links

Other THAP finger family TFs
Other Caenorhabditis elegans TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE06803 Caenorhabditis remanei CRE06803 I 0.757
CBN10324 Caenorhabditis brenneri CBN10324 I 0.730