Gfo_R004116 (Geospiza fortis)
THAP finger

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05485 (THAP) IPR006612 Gfo_R004116 T349360_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
THAP1
M08176_2.00
Homo sapiens
DNHKGGMRR

YYKCCMDNH
ChIP-seq
Mathelier et al.(2014)
MA0597.1
0.930 0.930
THAP1
M08020_2.00
Homo sapiens
SGCCATBTTKRNWVHGGGCRR

YYGCCCDBWNYMAAVATGGCS
ChIP-seq
Gerstein et al.(2012)
K562_THAP1_HudsonAlpha
0.930 0.930
THAP1
M09439_2.00
Homo sapiens
GCCCDVVNBVRVSVKGGCBSCB

VGSVGCCMBSBYBVNBBHGGGC
Misc
Kulakovskiy et al.(2013)
THAP1_HUMAN.H11MO.0.C
0.930 0.930
THAP1
M11412_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$THAP1_01
0.930 0.930
THAP1
M11413_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$THAP1_02
0.930 0.930
THAP1
M11414_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$THAP1_04
0.930 0.930
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R004116 THAP finger 1 60

Links

Other THAP finger family TFs
Other Geospiza fortis TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000004992 Ailuropoda melanoleuca ENSAMEG00000004992 I 0.711
THAP1 Anolis carolinensis ENSACAG00000005705 I 0.711
Afo_R005722 Aptenodytes forsteri Afo_R005722 I 0.864
ENSAMXG00000007136 Astyanax mexicanus ENSAMXG00000007136 I 0.737
Brh_R003908 Buceros rhinoceros Brh_R003908 I 0.848
Aan_R002310 Calypte anna Aan_R002310 I 0.877
THAP1 Canis familiaris ENSCAFG00000005418 I 0.711
ENSCHOG00000005563 Choloepus hoffmanni ENSCHOG00000005563 I 0.711
ENSCHOG00000005457 Choloepus hoffmanni ENSCHOG00000005457 I 0.964
THAP1 Dasypus novemcinctus ENSDNOG00000047233 I 0.711
ENSDORG00000014207 Dipodomys ordii ENSDORG00000014207 I 0.929
THAP1 Equus caballus ENSECAG00000000020 I 0.965
THAP1 Felis catus ENSFCAG00000027837 I 0.711
ENSFALG00000005181 Ficedula albicollis ENSFALG00000005181 I 0.737
THAP1 Gallus gallus ENSGALG00000015385 I 0.737
THAP1 Loxodonta africana ENSLAFG00000003647 I 0.711
THAP1 Monodelphis domestica ENSMODG00000010093 I 0.711
Thap1 Mus musculus ENSMUSG00000037214 I 0.947
THAP1 Ornithorhynchus anatinus ENSOANG00000000699 I 0.743
THAP1 Oryctolagus cuniculus ENSOCUG00000001391 I 0.711
THAP1 Otolemur garnettii ENSOGAG00000002708 I 0.711
ENSPSIG00000017440 Pelodiscus sinensis ENSPSIG00000017440 I 1.000
Pvit_16121 Pogona vitticeps Pvit_16121 I 0.711
Tal_R008759 Tyto alba Tal_R008759 I 0.864
THAP1 Vicugna pacos ENSVPAG00000001157 I 0.711