Pvit_02386 (Pogona vitticeps)
THAP finger

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05485 (THAP) IPR006612 Pvit_02386 T349416_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
THAP12
M02539_2.00
Gallus gallus
NBNYCKGKMNNN

NNNKMCMGRNVN
PBM
Weirauch et al.(2014)
pTH8688
0.931 0.931
THAP12
M02538_2.00
Homo sapiens
NNNYMBNNBGRN

NYCVNNVKRNNN
PBM
Weirauch et al.(2014)
pTH9190
0.879 0.879
prkrirb
M02536_2.00
Danio rerio
NNMCMGMSGGNN

NNCCSKCKGKNN
PBM
Weirauch et al.(2014)
pTH8319
0.776 0.776
prkrirb
M02540_2.00
Oryzias latipes
NNBBCCGGNHN

NDNCCGGVVNN
PBM
Weirauch et al.(2014)
pTH9383
0.707 0.707
prkrirb
M02541_2.00
Tetraodon nigroviridis
CCCGCGGG

CCCGCGGG
PBM
Weirauch et al.(2014)
pTH8574
0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_02386 THAP finger 3 65

Links

Other THAP finger family TFs
Other Pogona vitticeps TFs

Invalid Input OrderBy

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action