CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_16121
(
Pogona vitticeps
)
THAP finger
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05485 (THAP)
IPR006612
Pvit_16121
T349421_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
THAP1
M08176_2.00
Homo sapiens
DNHKGGMRR
YYKCCMDNH
ChIP-seq
Mathelier et al.(2014)
MA0597.1
0.908
0.908
THAP1
M08020_2.00
Homo sapiens
SGCCATBTTKRNWVHGGGCRR
YYGCCCDBWNYMAAVATGGCS
ChIP-seq
Gerstein et al.(2012)
K562_THAP1_HudsonAlpha
0.908
0.908
THAP1
M09439_2.00
Homo sapiens
GCCCDVVNBVRVSVKGGCBSCB
VGSVGCCMBSBYBVNBBHGGGC
Misc
Kulakovskiy et al.(2013)
THAP1_HUMAN.H11MO.0.C
0.908
0.908
THAP1
M11412_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$THAP1_01
0.908
0.908
THAP1
M11413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$THAP1_02
0.908
0.908
THAP1
M11414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$THAP1_04
0.908
0.908
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_16121
THAP finger
4
83
SCSAYRCRNRYDKEKPISFHKFPLTRPDLCKKWEAAVRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKDNAVPTIFCH
Links
Other
THAP finger
family TFs
Other
Pogona vitticeps
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy