CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SVUK_0001082501
(
Strongylus vulgaris
)
THAP finger
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05485 (THAP)
IPR006612
SVUK_0001082501
T350153_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0001082501-mRNA-1
THAP finger
4
141
TCGFPNCKFRSRYRGQEDNRHFYRIPKRPQVLRQRWLLAIGRTEETVVSQVLMSIRLSIGGVNCDDGRRHTXXXXXXXXXXXXSFFQLRICSAHFEGGEKKEGDIPVPDPTVDKQLNIELPPKESKGGERKRNKGSPP
Links
Other
THAP finger
family TFs
Other
Strongylus vulgaris
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g00189
Acanthocheilonema viteae
nAv.1.0.1.g00189
N
0.889
OFLC_0001387901
Onchocerca flexuosa
OFLC_0001387901
N
0.868
Bm4231
Brugia malayi
Bm4231
N
0.868
nLs.2.1.2.g05929
Litomosoides sigmodontis
nLs.2.1.2.g05929
N
0.857
WBGene00242032
Onchocerca volvulus
WBGene00242032
N
0.852
nOo.2.0.1.g01120
Onchocerca ochengi
nOo.2.0.1.g01120
N
0.852
CBN17931
Caenorhabditis brenneri
CBN17931
N
0.849
GPUH_0001162601
Gongylonema pulchrum
GPUH_0001162601
N
0.836
TCLT_0000442401
Thelazia callipaeda
TCLT_0000442401
N
0.825
LOAG_02009
Loa loa
LOAG_02009
N
0.793
HDID_0000845101
Hymenolepis diminuta
HDID_0000845101
N
0.766
SBAD_0000046801
Soboliphyme baturini
SBAD_0000046801
N
0.755
SSTP_0001239300
Strongyloides stercoralis
SSTP_0001239300
N
0.725
PXEA_0003384801
Protopolystoma xenopodis
PXEA_0003384801
N
0.704