BHLH157 (Arabidopsis thaliana)
Unknown

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
Unknown Unknown AT1G64625 T350175_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Basic helix-loop-helix (bHLH) phytochrome interacting factor. Interacts specifically with the far-red light#Aeiabsorbing Pfr form of phyB through a conserved domain called the active phyB binding motif. Upon light exposure, PIF7 rapidly migrates to intranuclear speckles, where it colocalizes with phyB. Role as negative regulator of phyB-mediated seedling deetiolation.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH157
M07312_2.00		 Arabidopsis thaliana
NRRWDACGTRNNNDWNHHBN
NVDDNWHNNNYACGTHWYYN		 Dap-seq
OMalley et al.(2016)
bHLH157_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G64625.3 Unknown 1 503

Links

Other Unknown family TFs
Other Arabidopsis thaliana TFs

0 Related TFs

">No related TF found