CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Q9SXJ0_TOBAC
(
Nicotiana tabacum
)
Unknown
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Unknown
Unknown
Q9SXJ0_TOBAC
T350383_2.00
HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q9SXJ0_TOBAC
M11457_2.00
Nicotiana tabacum
VKDNKNWBGWGG
CCWCVWNMNHMB
Transfac
Matys et al.(2006)
P$LIM1_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Q9SXJ0_TOBAC
Unknown
1
200
MAFAGTTQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTVKLGNYNSFEGVLYCRPHFDQLFKQTGSLDKSFEGTPKIVKPQKPIDSEKPQVAKVTSMFGGTREKCFGCKKTVYPTEKVSANGTPYHKSCFQCSHGGCVISPSNYTAHEGRLYCKHHHIQLIKEKGNLSKLEGDHEMNSTTTTEVTAESYTADQVD
Links
Other
Unknown
family TFs
Other
Nicotiana tabacum
TFs
0 Related TFs
">No related TF found