ATWHY2 (Arabidopsis lyrata)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08536 (Whirly) IPR013742 scaffold_202038.1 T350562_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_202038.1 Whirly 64 199

Links

Other Whirly family TFs
Other Arabidopsis lyrata TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WHY2 Arabidopsis thaliana AT1G71260 N 0.985
Carubv10020880m.g Capsella rubella Carubv10020880m.g N 0.926
Cagra.0147s0016 Capsella grandiflora Cagra.0147s0016 N 0.919
Bostr.10273s0220 Boechera stricta Bostr.10273s0220 N 0.904
Thhalv10019058m.g Eutrema salsugineum Thhalv10019058m.g N 0.875
Bra016150 Brassica rapa Bra016150 N 0.801
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N 0.801
ATWHY2 Populus trichocarpa POPTR_0003s04700 N 0.795
Bo6g112840 Brassica oleracea Bo6g112840 N 0.794
mgf015710m Mimulus guttatus mgf015710m N 0.787
Lus10035067.g Linum usitatissimum Lus10035067.g N 0.787
Lus10017892.g Linum usitatissimum Lus10017892.g N 0.772
MDP0000168614 Malus domestica MDP0000168614 N 0.772
Eucgr.K01091 Eucalyptus grandis Eucgr.K01091 N 0.772
Pm022821 Prunus mume Pm022821 N 0.757
Solyc11g044750.1 Solanum lycopersicum Solyc11g044750.1 N 0.757
PRUPE_ppa011529mg Prunus persica PRUPE_ppa011529mg N 0.757
evm.TU.supercontig_249.9 Carica papaya evm.TU.supercontig_249.9 N 0.750
PGSC0003DMG400022930 Solanum tuberosum PGSC0003DMG400022930 N 0.750
MLOC_19666 Hordeum vulgare MLOC_19666 N 0.750
MTR_7g116270 Medicago truncatula MTR_7g116270 N 0.746
GLYMA19G43880 Glycine max GLYMA19G43880 N 0.739
chr1.LjT14G19.90.nc Lotus japonicus chr1.LjT14G19.90.nc N 0.735
cassava24783.valid.m1 Manihot esculenta cassava24783.valid.m1 N 0.735
orange1.1g026312m.g Citrus sinensis orange1.1g026312m.g N 0.724
GLYMA03G41270 Glycine max GLYMA03G41270 N 0.713
Gorai.004G266000 Gossypium raimondii Gorai.004G266000 N 0.713
TCM_035992 Theobroma cacao TCM_035992 N 0.706