29736.m002027 (Ricinus communis)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 29736.m002027 T350595_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29736.m002027 Whirly 95 230

Links

Other Whirly family TFs
Other Ricinus communis TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.934
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.875
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.875
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.868
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.868
mgf002465m Mimulus guttatus mgf002465m N 0.868
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.861
Bo7g080560 Brassica oleracea Bo7g080560 N 0.860
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.860
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.860
Bra024809 Brassica rapa Bra024809 N 0.853
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.853
WHY3 Arabidopsis thaliana AT2G02740 N 0.853
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.853
WHY1 Arabidopsis thaliana AT1G14410 N 0.853
Bo8g066030 Brassica oleracea Bo8g066030 N 0.853
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.853
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.853
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.853
Bra016702 Brassica rapa Bra016702 N 0.846
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.846
PK22670.1 Cannabis sativa PK22670.1 N 0.846
TCM_011795 Theobroma cacao TCM_011795 N 0.846
MDP0000268451 Malus domestica MDP0000268451 N 0.846
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.838
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.838
Pm006558 Prunus mume Pm006558 N 0.838
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 0.838
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N 0.838
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.838
Cla022217 Citrullus lanatus Cla022217 N 0.831
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.831
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.824
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.816
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.809
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.801
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.794
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.787
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.787
LjSGA_053590.1 Lotus japonicus LjSGA_053590.1 N 0.780
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.757
Ca_24297 Cicer arietinum Ca_24297 N 0.750
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.743
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.743
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.743
Si006951m.g Setaria italica Si006951m.g N 0.743
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.735
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.728
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.728
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.728
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.706
OBART06G03050 Oryza barthii OBART06G03050 N 0.706
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.706
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.706
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.706
OS06G0145800 Oryza sativa OS06G0145800 N 0.706
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 0.706
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.706
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.706
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.706