cassava24783.valid.m1 (Manihot esculenta)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 cassava24783.valid.m1 T350597_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava24783.valid.m1 Whirly 54 189

Links

Other Whirly family TFs
Other Manihot esculenta TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.K01091 Eucalyptus grandis Eucgr.K01091 N 0.801
ATWHY2 Populus trichocarpa POPTR_0003s04700 N 0.795
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N 0.794
mgf015710m Mimulus guttatus mgf015710m N 0.779
Solyc11g044750.1 Solanum lycopersicum Solyc11g044750.1 N 0.772
Lus10017892.g Linum usitatissimum Lus10017892.g N 0.765
Lus10035067.g Linum usitatissimum Lus10035067.g N 0.765
Pm022821 Prunus mume Pm022821 N 0.757
PRUPE_ppa011529mg Prunus persica PRUPE_ppa011529mg N 0.757
MLOC_19666 Hordeum vulgare MLOC_19666 N 0.750
MDP0000168614 Malus domestica MDP0000168614 N 0.750
PGSC0003DMG400022930 Solanum tuberosum PGSC0003DMG400022930 N 0.750
cassava9653.m1 Manihot esculenta cassava9653.m1 N 0.743
ATWHY2 Arabidopsis lyrata scaffold_202038.1 N 0.735
chr1.LjT14G19.90.nc Lotus japonicus chr1.LjT14G19.90.nc N 0.735
Bostr.10273s0220 Boechera stricta Bostr.10273s0220 N 0.735
GLYMA19G43880 Glycine max GLYMA19G43880 N 0.731
WHY2 Arabidopsis thaliana AT1G71260 N 0.728
Carubv10020880m.g Capsella rubella Carubv10020880m.g N 0.728
Thhalv10019058m.g Eutrema salsugineum Thhalv10019058m.g N 0.721
Cagra.0147s0016 Capsella grandiflora Cagra.0147s0016 N 0.721
orange1.1g026312m.g Citrus sinensis orange1.1g026312m.g N 0.716
MTR_7g116270 Medicago truncatula MTR_7g116270 N 0.716
TCM_035992 Theobroma cacao TCM_035992 N 0.713
PK20247.1 Cannabis sativa PK20247.1 N 0.706