orange1.1g024467m.g (Citrus sinensis)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 orange1.1g024467m.g T350641_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g024467m Whirly 91 226
orange1.1g027008m Whirly 91 226
orange1.1g027308m Whirly 91 210

Links

Other Whirly family TFs
Other Citrus sinensis TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N 1.000
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N 0.912
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N 0.894
Cla022217 Citrullus lanatus Cla022217 N 0.890
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N 0.890
MDP0000268451 Malus domestica MDP0000268451 N 0.882
TCM_011795 Theobroma cacao TCM_011795 N 0.882
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N 0.882
Pm006558 Prunus mume Pm006558 N 0.875
Bra016702 Brassica rapa Bra016702 N 0.875
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N 0.875
Cucsa.005520 Cucumis sativus Cucsa.005520 N 0.868
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N 0.868
VIT_01s0026g01720 Vitis vinifera VIT_01s0026g01720 N 0.868
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N 0.860
Bo8g066030 Brassica oleracea Bo8g066030 N 0.860
Lus10036723.g Linum usitatissimum Lus10036723.g N 0.853
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N 0.853
WHY1 Arabidopsis thaliana AT1G14410 N 0.853
PK22670.1 Cannabis sativa PK22670.1 N 0.846
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N 0.846
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N 0.846
WHY3 Arabidopsis thaliana AT2G02740 N 0.838
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N 0.838
Carubv10010024m.g Capsella rubella Carubv10010024m.g N 0.838
29736.m002027 Ricinus communis 29736.m002027 N 0.838
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N 0.831
mgf002465m Mimulus guttatus mgf002465m N 0.831
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N 0.831
Bra024809 Brassica rapa Bra024809 N 0.831
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N 0.831
Bo7g080560 Brassica oleracea Bo7g080560 N 0.831
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N 0.831
Carubv10017841m.g Capsella rubella Carubv10017841m.g N 0.824
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N 0.824
LjSGA_035916.1.1 Lotus japonicus LjSGA_035916.1.1 N 0.792
GLYMA18G16200 Glycine max GLYMA18G16200 N 0.787
GLYMA08G40850 Glycine max GLYMA08G40850 N 0.772
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N 0.765
LjSGA_053590.1 Lotus japonicus LjSGA_053590.1 N 0.756
Sb10g003170 Sorghum bicolor Sb10g003170 N 0.743
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N 0.743
PDK_20s1701491g001 Phoenix dactylifera PDK_20s1701491g001 N 0.740
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N 0.735
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N 0.735
Si006951m.g Setaria italica Si006951m.g N 0.735
GRMZM2G155662 Zea mays GRMZM2G155662 N 0.735
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N 0.721
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N 0.721
Ca_24297 Cicer arietinum Ca_24297 N 0.721
MLOC_11586 Hordeum vulgare MLOC_11586 N 0.721
OMERI06G03280 Oryza meridionalis OMERI06G03280 N 0.706
LPERR06G02670 Leersia perrieri LPERR06G02670 N 0.706
OBART06G03050 Oryza barthii OBART06G03050 N 0.706
OMERI07G11550 Oryza meridionalis OMERI07G11550 N 0.706
OS06G0145800 Oryza sativa OS06G0145800 N 0.706
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N 0.706
BGIOSGA022297 Oryza indica BGIOSGA022297 N 0.706
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N 0.706
ONIVA06G03980 Oryza nivara ONIVA06G03980 N 0.706
OPUNC06G02750 Oryza punctata OPUNC06G02750 N 0.706
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N 0.706
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N 0.701