orange1.1g026312m.g (Citrus sinensis)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 orange1.1g026312m.g T350642_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g026312m Whirly 65 198
orange1.1g026468m Whirly 65 198
orange1.1g028165m Whirly 65 198
orange1.1g028964m Whirly 65 198
orange1.1g030060m Whirly 65 179
orange1.1g030376m Whirly 65 178

Links

Other Whirly family TFs
Other Citrus sinensis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.K01091 Eucalyptus grandis Eucgr.K01091 N 0.754
Lus10035067.g Linum usitatissimum Lus10035067.g N 0.746
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N 0.746
mgf015710m Mimulus guttatus mgf015710m N 0.746
Lus10017892.g Linum usitatissimum Lus10017892.g N 0.731
Solyc11g044750.1 Solanum lycopersicum Solyc11g044750.1 N 0.728
Carubv10020880m.g Capsella rubella Carubv10020880m.g N 0.724
ATWHY2 Arabidopsis lyrata scaffold_202038.1 N 0.724
PGSC0003DMG400022930 Solanum tuberosum PGSC0003DMG400022930 N 0.721
cassava24783.valid.m1 Manihot esculenta cassava24783.valid.m1 N 0.716
TCM_035992 Theobroma cacao TCM_035992 N 0.716
WHY2 Arabidopsis thaliana AT1G71260 N 0.716
Thhalv10019058m.g Eutrema salsugineum Thhalv10019058m.g N 0.709
chr1.LjT14G19.90.nc Lotus japonicus chr1.LjT14G19.90.nc N 0.709
Cagra.0147s0016 Capsella grandiflora Cagra.0147s0016 N 0.706
Pm022821 Prunus mume Pm022821 N 0.701
GLYMA19G43880 Glycine max GLYMA19G43880 N 0.701